| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2782 |
|---|
| Symbol | |
|---|
| ID | 4076550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2941116 |
|---|
| End bp | 2942498 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638008107 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_614776 |
|---|
| Protein GI | 99082622 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.845682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAGA CACTGAATTG TATTTCGCCG ATCGACGGAT CGGTCTACGC CAGCCGCGAG
ACGCTGGATC TGGACGCCGC CCGTAGCGAG GTGGCCGCCG TGCGGTCTGC GCAAAAGGCT
TGGGCCGCGC GTCCGCTACA GGAACGTATC GATCTCGTGA TGGCGGGCGT CGCCGCCATT
GGCGAGATGA ACGATGAAAT CGTGCCTGAG CTTGCCCATA TGATGGGGCG TCCGGTACGG
TTTGGCGGCG AATTTGGTGG GTTCAACGAG CGCGCGTCGC ATATGGCGCA GATCGCTGCC
GAGTCGCTTG CGGACATCGA GGTTGGCGAG GACGCCACTT TCAAGCGTTA CATCAAACGC
ATTCCGCATG GTGTGGTCTT TGTGGTGGCG CCCTGGAACT ACCCCTACAT GACCGCGATC
AACACCGTCG CGCCAGCGCT TATCGCGGGC AACACCGTGG TGCTGAAGCA CGCCACCCAG
ACGCTCTTGG TCGGTGAGCG GATGGCTAAG GCGTTCCATG CGGCGGGCGT GCCTGAGGAT
GTGTTCAAGA ACGTGTTCCT CGATCACGAT ACCACCTCTG CTTTGATCGC GGAGAAGGCG
TTTGATTTTG TGAACTTTAC CGGTTCTGTC GGCGGCGGCC AGGCAATGGA ACGTGCCGCA
GCGGGCACCT TCACGGGCGT TGGGACCGAG CTCGGTGGCA AGGATCCGGG CTACGTGATG
GAAGACGCGG ACGTGGACGC CGCAGTTGAT ACGCTGATCG ACGGCGCGAT GTTCAACTCT
GGCCAGTGCT GCTGCGGAAT CGAGCGCATC TACGTCCACG AGAGCCTCTA TGACGCTTTC
GTTGAAAAAG CGCTGGCGGT GGTCAATGGC TACAAGCTCG GCAACCCGCT GGATGCGGAA
ACCACCATCG GCCCGATGGC CAACGTGCGT TTTGCCCAAG AGGTGCGCGA CCAGATCGCC
GAGGCGATCG AACAGGGTGC CGTGGCGCAC ATCGCCACAA TGGATGCGGA TGATGGGGGT
GCCTATCTGA CTCCGCAGAT CCTGACCAAT GTCACCCATG AGATGCGCGT GATGCGCGAT
GAAAGCTTTG GACCGGTCGT GGGCATCATG AAGGTCTCCT CCGATGAGGA AGCGATCAAA
CTCATGAATG ACAGCGACTT CGGCCTCACC GCTTCCATCT GGACCAAGGA TCTGGAGCGC
GCACAGGCTG TGGGCGACCA AATCGAGACC GGCACCGTGT TCATGAACCG CGCAGATTAC
CTCGATCCGG GGCTCTGCTG GACCGGCTGC AAGAACACCG GTCGCGGCGG TGGTCTTTCG
GTGATCGGCT ATCACAACCT GACCCGGCCG AAGTCCTACC ACCTGAAAAA AGTCACCGCC
TAA
|
|---|
| Protein sequence | MGKTLNCISP IDGSVYASRE TLDLDAARSE VAAVRSAQKA WAARPLQERI DLVMAGVAAI
GEMNDEIVPE LAHMMGRPVR FGGEFGGFNE RASHMAQIAA ESLADIEVGE DATFKRYIKR
IPHGVVFVVA PWNYPYMTAI NTVAPALIAG NTVVLKHATQ TLLVGERMAK AFHAAGVPED
VFKNVFLDHD TTSALIAEKA FDFVNFTGSV GGGQAMERAA AGTFTGVGTE LGGKDPGYVM
EDADVDAAVD TLIDGAMFNS GQCCCGIERI YVHESLYDAF VEKALAVVNG YKLGNPLDAE
TTIGPMANVR FAQEVRDQIA EAIEQGAVAH IATMDADDGG AYLTPQILTN VTHEMRVMRD
ESFGPVVGIM KVSSDEEAIK LMNDSDFGLT ASIWTKDLER AQAVGDQIET GTVFMNRADY
LDPGLCWTGC KNTGRGGGLS VIGYHNLTRP KSYHLKKVTA
|
|---|
| |