| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2779 |
|---|
| Symbol | |
|---|
| ID | 4076547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2938135 |
|---|
| End bp | 2939205 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638008104 |
|---|
| Product | Glu/Leu/Phe/Val dehydrogenase, dimerisation region |
|---|
| Protein accession | YP_614773 |
|---|
| Protein GI | 99082619 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.60322 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.877021 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTGA ACCTGACCGA GGAAACGGCA CCCGAAGGCT ATGAACGCCT CGTCTTTGCA
CAAGACCCCG AAAGCGGGCT GCAGGCCTTT ATATGTGTGC ACTCCACAGT TCTTGGCCCT
GCGGCGGGGG GGTGTCGGAT GTGGAATTAC GCCACCGTGG ATGAGGCGCG CATGGATGTG
CTGCGTCTGG CGGAGGGGAT GACCTCAAAG AACGCCATGG CAGATCTGGC GCTTGGTGGC
GGCAAATCCG TGATCGTCGG CAATCCGCAA AGCGACAAGT CCCCCGCATT GCTCCGTGCA
TTTGGGCGCG CCGTCCAGAG CCTCGATGGC AGCTATTACA CCGCCGAAGA TGTGGGAATT
TCGCCGGACG ACATGAAGAT CGTCGCCGAG GAAACCCCAT ATGCCGTTGG GCTTGAAGAT
GGGGCGCATG GGACCGGAGA TCCCTCTCCC TTTACCGCGC AGGGGGTGTT CCAGTGTCTT
CTGGTCGGGG CAGAAGTGGT CTTTGGCACC AGCGATCTCT CCGGGCGTCG GGTGCTGGTT
CAAGGTCTGG GCCACGTTGG AATGTCTCTG GCCGAAAAGC TCTACGGTGC CGGGGCGGAG
CTGATTGTGG CCGACATCAA TGAGGCTGCG CTTCAGCATG CAAAAACTGC ATTTGGTGCA
ACGATTTGCG ACCCTGCAGA GATTTTTGAG ACCGAGATGG ACATCTTTGC ACCCTGCGCA
CTTGGGGGCG TGCTGACAGA GGCAACAGCG CAAAAACTGT CTGCAAAACT CGTTTGTGGT
GCTGCGAACA ACCAGCTTGA GACGCCCGAG GTCGCAGATG CGCTGCGCGC AAGGGGTATT
CGCTACCTGC CAGACTATGT GGTCAATGCT GGCGGCATCA TCAGTGTCGC AGGCGAGATC
CATAAAGCGG GCACAAGCTA CCGCACCGAG CGGCTGGATG GCGTTGCCGC ACGCATCCGC
ACCTTGGTTG ACCTCAGCGA CAAGACCGGG CGCACCACCA CCGCCGTGGC AGACGACATG
GTTGCAGATA TTCTCGCCAA GGCCTCGAAC ACCGCGCGAG GTGCAGCATG A
|
|---|
| Protein sequence | MTLNLTEETA PEGYERLVFA QDPESGLQAF ICVHSTVLGP AAGGCRMWNY ATVDEARMDV
LRLAEGMTSK NAMADLALGG GKSVIVGNPQ SDKSPALLRA FGRAVQSLDG SYYTAEDVGI
SPDDMKIVAE ETPYAVGLED GAHGTGDPSP FTAQGVFQCL LVGAEVVFGT SDLSGRRVLV
QGLGHVGMSL AEKLYGAGAE LIVADINEAA LQHAKTAFGA TICDPAEIFE TEMDIFAPCA
LGGVLTEATA QKLSAKLVCG AANNQLETPE VADALRARGI RYLPDYVVNA GGIISVAGEI
HKAGTSYRTE RLDGVAARIR TLVDLSDKTG RTTTAVADDM VADILAKASN TARGAA
|
|---|
| |