| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2778 |
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| Symbol | |
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| ID | 4076546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2936897 |
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| End bp | 2938138 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008103 |
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| Product | branched-chain alpha-keto acid dehydrogenase E1 component |
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| Protein accession | YP_614772 |
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| Protein GI | 99082618 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.602804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.653489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA ACGAAACCTA TGCACCGCTC GCACTGAATG TCCCGGAGCC GGGCTGCCGT
CCGGGCGATA CGCCTGATTT TTCGTATTTC GAGGTGCCCC GCGCCGGAGC CGTGGCGCGG
CCTTCGGTCG ATGTGGACCC TGACGACATG CGTGAGATGG CGTTTTCCAT CGTGCGTGTC
CTCAACAAAG AGGGCGAAGC GGTGGGCGAC TGGGCCGGAA CGCTCTCTCC GGAAGAGTTG
CGCGAAGGAT TGCGGGACAT GATGCTTCTG CGCGCCTTTG ATGCGCGGAT GCTGAACGCG
CAGCGCCAGG GCAAGACCAG TTTCTACATG CAGCATCTTG GCGAGGAGGC CGTCAGCTGT
GCCTTCTCTC GCGCGCTCAA GGATGGGGAT ATGAATTTTC CCACCTATCG GCAGGCGGGC
CTGTTGATTG CGCGGGACTA TCCGCTGGTC ACCATGATGA ACCAGATCTA TTCCAACGCC
GACGACCCGT TGCACGGGCG GCAGTTGCCG ATCATGTACT CCTCAAAAGA ACACGGCTTC
TTTTCGATTT CGGGCAACCT CGGCACCCAG TTCGTGCAGG CTGTCGGCTG GGCGATGGCC
TCAGCGATTT CCGGTGATAC CAAGATCGCC GCAGGCTGGA TTGGCGATGG TTCCACCGCC
GAGAGCGACT TTCACGCCGC GATGGTGTTT GCCTCGACTT ATAATGCGCC GGTGGTGCTC
AATATCGTCA ACAACCAGTG GGCGATCTCG ACCTTTCAGG GCATCGCACG CGGTGGGGTG
GGCACCTTTG CTGCGCGCGG GCATGGCTTT GGCATCGCGT CGATCCGGGT AGATGGAAAC
GACTATCTCG CGGTCAACGC GGTGGCCAAA TGGGCGGCCG AACGCGCACG TCTGGGCCTT
GGCCCCACCT TGATCGAGCA TGTGACCTAT CGCGCGGGTG GCCATTCCAC CAGCGATGAC
CCTTCGGCCT ATCGCTCCGC AGATGAGGGC GCGGCATGGC CGCTTGGTGA TCCCATCGAC
CGTCTCAAAC GCCACCTTAT CCGGATCGGC GAGTGGAGTG AGGAGCGCCA CAGTCAGGCT
GAGGCGGAGT TGATGGATCA GGTCATCACC GCCCAGAAAG AGGCCGAAAA GGTCGGCACG
CTCGGTGGTG GCAAGGGCCC CTCGCCGCGC GACATGTTCG AGGGCGTGTT CGAGAAAATG
CCGCCTCATC TGATTAGGCA ACGACAGGAA GCGGGATACT GA
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| Protein sequence | MSDNETYAPL ALNVPEPGCR PGDTPDFSYF EVPRAGAVAR PSVDVDPDDM REMAFSIVRV
LNKEGEAVGD WAGTLSPEEL REGLRDMMLL RAFDARMLNA QRQGKTSFYM QHLGEEAVSC
AFSRALKDGD MNFPTYRQAG LLIARDYPLV TMMNQIYSNA DDPLHGRQLP IMYSSKEHGF
FSISGNLGTQ FVQAVGWAMA SAISGDTKIA AGWIGDGSTA ESDFHAAMVF ASTYNAPVVL
NIVNNQWAIS TFQGIARGGV GTFAARGHGF GIASIRVDGN DYLAVNAVAK WAAERARLGL
GPTLIEHVTY RAGGHSTSDD PSAYRSADEG AAWPLGDPID RLKRHLIRIG EWSEERHSQA
EAELMDQVIT AQKEAEKVGT LGGGKGPSPR DMFEGVFEKM PPHLIRQRQE AGY
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