| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2777 |
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| Symbol | |
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| ID | 4076545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2935882 |
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| End bp | 2936895 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638008102 |
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| Product | branched-chain alpha-keto acid dehydrogenase E1 component |
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| Protein accession | YP_614771 |
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| Protein GI | 99082617 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.222973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.60889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAGA TGACCATGAT TGAGGCCCTG CGCGACGCGC ATGATGTGGC CATGGAGAAA
GACGACCGTG TTGTCGTCTA CGGTGAGGAT GTCGGGTATT TTGGCGGTGT GTTTCGTGTC
ACTGCAGGCC TGCAGGCGAA ATACGGCAAG TCACGCTGCT TTGATACGCC TATCAACGAG
GCGGGTATTG TTGGCACCGC GATCGGGATG GCCGCCTATG GTCTGCGCCC TGTGATCGAA
ATCCAGTTCG CCGATTACGT CTATCCGGCC ATTGACCAGA TCGTCTCAGA GGCCGCCCGC
CTGCGGCATC GCTCGGCGGG GGATTTCACC TGCCCGATCG TGATCCGCAT GCCCACCGGT
GGGGGCATCT TTGGCGGGCA GACCCACAGC CAGTCGCCCG AGGCATTCTT TACCCATTCC
TCTGGTCTGA AAACGGTAGT GCCTTCCAAT CCAAGCGATG CCAAGGGGCT GCTCCTCGCT
GCGATCGAAG ACCCGGATCC GGTGATCTTT CTGGAGCCAA AGCGGCTCTA TAATGGGCCT
TTTGACGGAT ATCACGACCG TCCCGTTACC AGTTGGAAGA AGCACCCACT GGGTGATGTC
GCAGACGGCT ACAACCCGAT CCCGCTTGGC AAGGCCGCCA TCCGTCGCAA AGGCAACGAC
GTCACGGTGC TGGCCTATGG CACCATGGTC TATGTCGCCG AAGCCGCCGC CGAAGAAAGC
GGCGTCGACG CCGAGGTGAT CGACCTGCGC ACTCTGCTGC CCCTGGACCT CGAGACCATC
GTGGCCTCTG TGGAAAAGAC CGGGCGCTGC GTCATCGTGC ATGAGGCGAC CAAGACCTCT
GGCTTTGGCG CGGAACTGAT GTCGATTGTG CAGGAAAACT GTTTCTACAG CCTCGAAGCG
CCCATCATTC GCGTTACTGG CTGGGATACG CCCTACCCGC ATGCGCAGGA ATGGAATTAC
TTCCCCGGCC CAGAACGGGT GGGCGAAGCG CTGAAGAAAT GCATGGAGGA CTGA
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| Protein sequence | MAQMTMIEAL RDAHDVAMEK DDRVVVYGED VGYFGGVFRV TAGLQAKYGK SRCFDTPINE
AGIVGTAIGM AAYGLRPVIE IQFADYVYPA IDQIVSEAAR LRHRSAGDFT CPIVIRMPTG
GGIFGGQTHS QSPEAFFTHS SGLKTVVPSN PSDAKGLLLA AIEDPDPVIF LEPKRLYNGP
FDGYHDRPVT SWKKHPLGDV ADGYNPIPLG KAAIRRKGND VTVLAYGTMV YVAEAAAEES
GVDAEVIDLR TLLPLDLETI VASVEKTGRC VIVHEATKTS GFGAELMSIV QENCFYSLEA
PIIRVTGWDT PYPHAQEWNY FPGPERVGEA LKKCMED
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