Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2760 |
Symbol | |
ID | 4077632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2908299 |
End bp | 2909255 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638008085 |
Product | ABC transporter related |
Protein accession | YP_614754 |
Protein GI | 99082600 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATAC CGGGGGCAAG AGCCGCGATG ACTGACGAGG CAATCCGTAT TGAAGCTTTG CGCAAAACCT ACAAGGGCCG CAAAGGCCAG CCCGAGAAGC ACGCACTGAA GGGGATCGAC CTCACCGTGC CGCGTGGATC GGTCTTTGGA CTTCTGGGGC CAAATGGCGC GGGCAAATCG ACGCTGATCA ATATCCTCGC CGGTCTGGTG CTGAAAACGT CGGGCAAGGT GACGATCTGG GGCTTTGATC AGGACGCCAA TCCCCGTCAA AGCCGCGCCT CGATCGGGGT GATGCCGCAA GAATTGAACC TCGACCCGTT CTTTACCCCG CGCGGGGCGC TGGAGGTGCA GGCGGGGCTC TATGGCGTGC CAAAATCCGA GCGAGACAGC GACGGCATCC TGAAACTCAT CGGGCTGGAG GACAAGGCCG AAGCCTATGC GCGTACGCTC TCGGGCGGCA TGCGGCGCAG GCTTTTGTTG GGCAAGGCGC TGGTGCATCG CCCCAATATT CTGGTGCTCG ATGAACCTAC CGCCGGTGTG GACATCGAGT TGCGCCAGAT GCTGTGGGAG AACGTCCGTA AGCTGAACGC GCAGGGCATG ACCATCATCC TCACCACGCA TTATCTCGAG GAAGCGCAGG AGATGTGCGA CGAGATCGCC ATCATCAATC AGGGCGAAGT GGTGGCACGG GACTCGACCG CGAACCTCTT GGGCCGTCTG GATGCCCGCG CCATGGTGGT GCAGCCTGCC GCCCCAGTGA CGACCCTGCC AGAAGGGCCT GGGATTGAGG CGGAACTGCG CGGCGATGGG GCCGTGGTGT TGCGCTATCA CAGCAATGAA ACGTCGGCCG AGGCGGTGCT CGAAGCGGTG CGGGCCGCCG GGATTTCAAT CCGTGACGTC AAAACCGAAG AAGCCGACCT CGAGGATGTC TTCCTCGCAC TGACAAAGTC CCGCTGA
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Protein sequence | MEIPGARAAM TDEAIRIEAL RKTYKGRKGQ PEKHALKGID LTVPRGSVFG LLGPNGAGKS TLINILAGLV LKTSGKVTIW GFDQDANPRQ SRASIGVMPQ ELNLDPFFTP RGALEVQAGL YGVPKSERDS DGILKLIGLE DKAEAYARTL SGGMRRRLLL GKALVHRPNI LVLDEPTAGV DIELRQMLWE NVRKLNAQGM TIILTTHYLE EAQEMCDEIA IINQGEVVAR DSTANLLGRL DARAMVVQPA APVTTLPEGP GIEAELRGDG AVVLRYHSNE TSAEAVLEAV RAAGISIRDV KTEEADLEDV FLALTKSR
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