| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2755 |
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| Symbol | |
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| ID | 4077627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2903128 |
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| End bp | 2904465 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008080 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_614749 |
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| Protein GI | 99082595 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0444358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAT TTGCGATGGC GGCTCTGGGC GGGACGCTTG CGGGCTTTGT GGCAACAACC
TACGTGGCAG CGCCGTTGCT GGCACAGGAG AGCAATAACA CAACCGTCTA TGAGCAACTC
GATCTGTTTG GTGACATCTT CGAGCGCATT CGGGCGCAAT ACGTCGAAGA GGTCGACGAA
AAAGAGCTGA TCGAGGCGGC GATTGGCGGC ATGCTGCAGT CCCTGGATCC GCACTCTAGC
TATCTGTCCC CTGATGATGC GAGCAAGATG CGGGTGCAGA CCCGTGGGGA GTTCGGTGGC
CTTGGCATCG AAGTCACGCA GGAAGACGGC TTTGTCAAAG TGGTGTCGCC GATGGATGGC
ACACCCGCAG ACGAAGCCGG AGTCGAGGCG GGCGATTTTA TCACCCATGT GGATGGCGAG
AGCCTGTTGG GGCTTGGACT TGATGAAGCG GTCGAACTGA TGCGCGGCCC GGTGGGGTCT
GAAATCATCA TCACCATCGT GCGCGAAGGC GAAGACGAGC CTTTTGATGT TTCCATTATT
CGCGACACCA TCAAGCTGAC GGCTGTACGC GGTCGGACCG AAGGGGACTC GGTGGTGCTG
CGGGTCACGA CGTTCAATGA ACAGACCACG CCCAACCTCG AGGCCAAGCT CGAAGAGCAA
GTCGAGGCGC TGGGCGGCAT GGACAACGTG AACGGCATCG TGCTTGACCT GCGCAACAAC
CCGGGCGGGT TGCTGACCCA GGCGATCAGC GTAGCCGACA GCTTCCTTGA AAGCGGTGAA
ATCGTCTCTA CCCGTGGTCG CAATCCCGAG GATGGCGAGC GGTTCAATGC AACGCCGGGG
GACCTGGTTG GTGGCAAGCC GATTGTGGTG CTGATCAACG GTGGCTCCGC CTCCGCGTCC
GAGATTGTCG CCGGCGCGCT GCAAGACCAC CGCCGCGCGA TCGTTGTGGG CACCAAATCC
TTTGGCAAAG GGTCGGTTCA GACCGTGATG CCCCTCCGCA GCGACGGAGC CATGCGCCTC
ACCACCGCGC GGTATTACAC GCCCTCTGGC CGCTCCATTC AGGCACTGGG TGTCAGCCCG
GACATCGTTG TAGCGCAGCC GCGTCGCCGC CCCGAGGCTG AGGAAGATGA ACCCGCCAGC
AGCGCCTTTG GTCCCCGTTC AGAGGCGGAC CTGCGTGGTC GTCTGAACAA TGACAGCCTC
TCCGAGGATG AGGTGCGCCA GATCGAAGCG GATCGCGAGA AGGCTGAAAA AGCCGCAGAA
CTGCGTGAAC AGGATTATCA GCTGGCCTAC GCCATCGATA TTCTGAAAGG CCTCTCGGCT
CTGGGTCCTA AAGACTAA
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| Protein sequence | MKKFAMAALG GTLAGFVATT YVAAPLLAQE SNNTTVYEQL DLFGDIFERI RAQYVEEVDE
KELIEAAIGG MLQSLDPHSS YLSPDDASKM RVQTRGEFGG LGIEVTQEDG FVKVVSPMDG
TPADEAGVEA GDFITHVDGE SLLGLGLDEA VELMRGPVGS EIIITIVREG EDEPFDVSII
RDTIKLTAVR GRTEGDSVVL RVTTFNEQTT PNLEAKLEEQ VEALGGMDNV NGIVLDLRNN
PGGLLTQAIS VADSFLESGE IVSTRGRNPE DGERFNATPG DLVGGKPIVV LINGGSASAS
EIVAGALQDH RRAIVVGTKS FGKGSVQTVM PLRSDGAMRL TTARYYTPSG RSIQALGVSP
DIVVAQPRRR PEAEEDEPAS SAFGPRSEAD LRGRLNNDSL SEDEVRQIEA DREKAEKAAE
LREQDYQLAY AIDILKGLSA LGPKD
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