| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2753 |
|---|
| Symbol | |
|---|
| ID | 4077625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 2901701 |
|---|
| End bp | 2902627 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638008078 |
|---|
| Product | PfkB |
|---|
| Protein accession | YP_614747 |
|---|
| Protein GI | 99082593 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.116104 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATACGC CTCAGATCCT CTGTCTTGGT GAGCCGCTGG TAGAGTTCAA CCAGACCCCC
GAAGGCCCCT TTGCCATGGG GTTTGGTGGC GATGTCTCCA ACGTCGCCAT CTCCGCCGCC
CGTCACGGCG CACAGACCGG GTTGATCACC CGCGTGGGCG ATGATCCGTT TGGCGCAGCG
CTCTGCGATC TTTGGGCCAA CGAAGGCCTT GTAACTGATC ATGCAGCGCG TGCTCAGGGA
GAGGAAACAG GGGTCTATTT CGTGACCCAT GATGCCAGCG GCCATCATTT CACCTACCGC
CGCAAGGGCT CTGCCGCATC GCGCCTGACA CCTCAAGATC TGCCGATGAA CGCCCTACAG
ACCTGCCCCA TTTTCTACGC CTCTGGCATC AGCCTTGCAG TGTCATCGAG CATGCAGGAT
GCGGTCATCG AAGCCGCCCA ACAGGCGCGC GCTGGTGGCG GTATTTTTGC CTTTGACCCC
AATCTGCGCG TGGCGCTCTG GCCGCTTGAG GTCGCGCGTG AGACCACGCA TCGCTGCATG
CAGATCTGCG ACGTGGCCTT GCCAGGGCTT GAGGATGCGC GCCAGTTGAC CGGCCTGCAT
GATGCCAAGG ACATCGCCAG CTTTTATCAC GAGCTGGGAC CACGCATTGT CGCACTGACG
CTTGGCGCCG AAGGTGTTCT GATCTCAGTC GAAGGCACGC AGCGCGTTCT TTCCGGGCAC
CGGGTCGATG CCAAGGACGC CACCGGCGCA GGCGATTGTT TCAACGGAGC GTTCCTCGCG
ACCCTCTTGG CCACGAACGA TCCTTTTTCA GCGGCAGAGC ACGCCAATAT GGCGGCGGCT
CTGTCGACCA CTGGATATGG CGCTGTGACG CCGATCCCAA CCCTTTCCCA AACCCGCAGC
GCGCTTGAAA CCGCTCAGCG GGCCTAA
|
|---|
| Protein sequence | MNTPQILCLG EPLVEFNQTP EGPFAMGFGG DVSNVAISAA RHGAQTGLIT RVGDDPFGAA
LCDLWANEGL VTDHAARAQG EETGVYFVTH DASGHHFTYR RKGSAASRLT PQDLPMNALQ
TCPIFYASGI SLAVSSSMQD AVIEAAQQAR AGGGIFAFDP NLRVALWPLE VARETTHRCM
QICDVALPGL EDARQLTGLH DAKDIASFYH ELGPRIVALT LGAEGVLISV EGTQRVLSGH
RVDAKDATGA GDCFNGAFLA TLLATNDPFS AAEHANMAAA LSTTGYGAVT PIPTLSQTRS
ALETAQRA
|
|---|
| |