Gene TM1040_2752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2752 
Symbol 
ID4077624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2900649 
End bp2901704 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content62% 
IMG OID638008077 
Productalanine racemase-like 
Protein accessionYP_614746 
Protein GI99082592 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0421965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC CCATCGATAC CCCTGCCGTT CTGGTCGATC TGAACGTGGC AGAGGCCAAT 
GTGCGCGCCT TCCAGAGCTA TTGCGACCGG CACAGCCTCA AGATGCGCCC TCATATCAAA
ACCCATAAGC TGCCACAGCT GGCCGAGTAT CAGATCGCGC AGGGAGCTAT TGGCATCACC
TGCCAGAAGA TCACCGAAGC CGAAGCGATG GTCGCGGGCG GCGACATGCG CGACATCTTG
ATCACCTATA ATATCCTCGG CGCAGAAAAG GTCGCCCGAT TGCGCGCCCT CTCTGAACGG
GTGGCGCTCT CGGTGGTGGC AGACAATCTC ACTGTGGTGG AGGGGCTGAG CGCCGGGTTT
GCCGGCGCGA ATAAACCCCT GCCGGTGCTG GTCGAATGCA ACACCGGAGC AGACCGATGT
GGGGTGGAAA CACCCGAGGC GGCGCTCGCG CTCGCGCAAG CGATTGACGC GGCGCCGGGG
CTCAAGTTTG CAGGGCTGAT GACCTACCCT CCGGTTGGCG GTGCCGCAAA GGTCACCACA
TGGCTCGCCG AAGCCAAGGC CCGGATAGAG GCCACGGATC TGACGGTGGA GGTGATTTCC
TCGGGCGGAT CGCCCGACAT GTGGCAAGCA CATGAGATGC CGCTCGCCAC GGAGTACCGG
GTCGGCACCT ACGTCTACAA TGACCGCTCG CTTGTGACAC GCGGCATCTG CACCTGGGAC
GATTGTGCCC TAACCGTTCT GGCCACGGTG GTTTCCACCC CTTCCGCGAC CCGCGCAGTC
ATTGATGCTG GTTCCAAGGT TCTAACCTCC GACCTGCTTG GGCTGGAAGG CTATGGGCAT
GTTCTGGGGT ATCCCGACTT CATGATTGAT CAACTGAGCG AGGAACACGG GCGGATCACC
TCGGCGCAGC CCACCGGGCT ACGGGTCGGC GATCAGGTTC GGATTGTGCC GAACCACGCC
TGCGTTGTCG CCAATATGCT CGATCATATC ACCCTGATGC GCGCGGAAGA GGTCGCAGGT
CAGGAAACCG TCGCGGCACG GGGGCAAGTT TGGTGA
 
Protein sequence
MTLPIDTPAV LVDLNVAEAN VRAFQSYCDR HSLKMRPHIK THKLPQLAEY QIAQGAIGIT 
CQKITEAEAM VAGGDMRDIL ITYNILGAEK VARLRALSER VALSVVADNL TVVEGLSAGF
AGANKPLPVL VECNTGADRC GVETPEAALA LAQAIDAAPG LKFAGLMTYP PVGGAAKVTT
WLAEAKARIE ATDLTVEVIS SGGSPDMWQA HEMPLATEYR VGTYVYNDRS LVTRGICTWD
DCALTVLATV VSTPSATRAV IDAGSKVLTS DLLGLEGYGH VLGYPDFMID QLSEEHGRIT
SAQPTGLRVG DQVRIVPNHA CVVANMLDHI TLMRAEEVAG QETVAARGQV W