Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2752 |
Symbol | |
ID | 4077624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2900649 |
End bp | 2901704 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638008077 |
Product | alanine racemase-like |
Protein accession | YP_614746 |
Protein GI | 99082592 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0421965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCTGC CCATCGATAC CCCTGCCGTT CTGGTCGATC TGAACGTGGC AGAGGCCAAT GTGCGCGCCT TCCAGAGCTA TTGCGACCGG CACAGCCTCA AGATGCGCCC TCATATCAAA ACCCATAAGC TGCCACAGCT GGCCGAGTAT CAGATCGCGC AGGGAGCTAT TGGCATCACC TGCCAGAAGA TCACCGAAGC CGAAGCGATG GTCGCGGGCG GCGACATGCG CGACATCTTG ATCACCTATA ATATCCTCGG CGCAGAAAAG GTCGCCCGAT TGCGCGCCCT CTCTGAACGG GTGGCGCTCT CGGTGGTGGC AGACAATCTC ACTGTGGTGG AGGGGCTGAG CGCCGGGTTT GCCGGCGCGA ATAAACCCCT GCCGGTGCTG GTCGAATGCA ACACCGGAGC AGACCGATGT GGGGTGGAAA CACCCGAGGC GGCGCTCGCG CTCGCGCAAG CGATTGACGC GGCGCCGGGG CTCAAGTTTG CAGGGCTGAT GACCTACCCT CCGGTTGGCG GTGCCGCAAA GGTCACCACA TGGCTCGCCG AAGCCAAGGC CCGGATAGAG GCCACGGATC TGACGGTGGA GGTGATTTCC TCGGGCGGAT CGCCCGACAT GTGGCAAGCA CATGAGATGC CGCTCGCCAC GGAGTACCGG GTCGGCACCT ACGTCTACAA TGACCGCTCG CTTGTGACAC GCGGCATCTG CACCTGGGAC GATTGTGCCC TAACCGTTCT GGCCACGGTG GTTTCCACCC CTTCCGCGAC CCGCGCAGTC ATTGATGCTG GTTCCAAGGT TCTAACCTCC GACCTGCTTG GGCTGGAAGG CTATGGGCAT GTTCTGGGGT ATCCCGACTT CATGATTGAT CAACTGAGCG AGGAACACGG GCGGATCACC TCGGCGCAGC CCACCGGGCT ACGGGTCGGC GATCAGGTTC GGATTGTGCC GAACCACGCC TGCGTTGTCG CCAATATGCT CGATCATATC ACCCTGATGC GCGCGGAAGA GGTCGCAGGT CAGGAAACCG TCGCGGCACG GGGGCAAGTT TGGTGA
|
Protein sequence | MTLPIDTPAV LVDLNVAEAN VRAFQSYCDR HSLKMRPHIK THKLPQLAEY QIAQGAIGIT CQKITEAEAM VAGGDMRDIL ITYNILGAEK VARLRALSER VALSVVADNL TVVEGLSAGF AGANKPLPVL VECNTGADRC GVETPEAALA LAQAIDAAPG LKFAGLMTYP PVGGAAKVTT WLAEAKARIE ATDLTVEVIS SGGSPDMWQA HEMPLATEYR VGTYVYNDRS LVTRGICTWD DCALTVLATV VSTPSATRAV IDAGSKVLTS DLLGLEGYGH VLGYPDFMID QLSEEHGRIT SAQPTGLRVG DQVRIVPNHA CVVANMLDHI TLMRAEEVAG QETVAARGQV W
|
| |