| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2744 |
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| Symbol | |
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| ID | 4077616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2888775 |
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| End bp | 2889809 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008069 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_614738 |
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| Protein GI | 99082584 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.480535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGTC CCGCTTTTGG CGCCCCACAC TCCCCTCCCG ACAGATGGTT TGACCTGATG
CGTTTTCTTT TGAAGCGGCT CGGCTTTTAT GCCGTTGCCT TTCTGGTGGC CGCGACCTTC
AACTTCATGA TCCCGCGCCT GTTGCCCGGC AACCCGGCGG ATATCATGCT GGCGAACTCC
GGTGGCATGA TCGCACCCGA AGCGCGCGAG GCGCTGATGG CCACCTTCGG GTTCATCGAT
GCACCGTTGC ACGAACAGTA TTTTGCCTAT CTTGGCTCGA TCTTCACCTG GGACTTTGGG
TTGTCGATCA AGTTCTACCC GATGCCGGTT GCCGATGTGC TGACGCAGGC GTTGCCGTGG
ACCCTGTTCC TGACGGGGGC GGCGTTGTTG ATTTCCTTTT CCGTAGGCAC CCTTCTGGGC
GTGCTGGCAG CCTGGCGGCG CGGGCAGCTT ACGGATGTGA TCGCCTCACC CACCGCGCTT
GCGCTGCAGT CGGTTCCGGC CGTGGTCGTC GCGCTCTGCG GGCTTTATTT CCTTGCGGTG
CGCAACCGCT TCTTCCCGAC CTCCTACGCC TTTGATCCCA AGCTCGACCC AAGTTGGAGC
TGGGAGTTCA TCTCATCCGT GGCATATCAC GGTTTTTTGC CGGTGGTGAC GCTGAGCGTG
GTGCTGATCG GCGGCTACCT CATCACCATG CGCAACAACA TGATCGGGCA ACTGGGCGAG
GACTACCTCG CCATGGCCGA AGCCAAGGGG CTGAGCGATG CGCGCGTGCG CTATGCCTAT
GCCGCTCGCA ACGCACTGCT GCCATCCGTC ACCGCGCTGG CGCTTAGTTT CGGGGCACTC
TTTGGTGGCT CGCTCATTAC CGAGGTGGTG TTCAACTATC CGGGTGTCGG CAACCTTTTG
TACCTCGGCA TCGTGGGGCG GGATTTCCCG CTGATCCAGG GCCAGCTTCT CATCATGACA
CTTGCCATGC TGCTCGCGAA CCTCGCGGTG GACCTGGCCT ACGTCTTCCT TGACCCCCGA
CTGAAGAGGG CCTGA
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| Protein sequence | MSGPAFGAPH SPPDRWFDLM RFLLKRLGFY AVAFLVAATF NFMIPRLLPG NPADIMLANS
GGMIAPEARE ALMATFGFID APLHEQYFAY LGSIFTWDFG LSIKFYPMPV ADVLTQALPW
TLFLTGAALL ISFSVGTLLG VLAAWRRGQL TDVIASPTAL ALQSVPAVVV ALCGLYFLAV
RNRFFPTSYA FDPKLDPSWS WEFISSVAYH GFLPVVTLSV VLIGGYLITM RNNMIGQLGE
DYLAMAEAKG LSDARVRYAY AARNALLPSV TALALSFGAL FGGSLITEVV FNYPGVGNLL
YLGIVGRDFP LIQGQLLIMT LAMLLANLAV DLAYVFLDPR LKRA
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