| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2733 |
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| Symbol | |
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| ID | 4077040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2876423 |
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| End bp | 2877151 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638008058 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_614727 |
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| Protein GI | 99082573 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00185097 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCATG GTATTCCGGC CCAAGCTGAC ACAAACCTGA CACGGAGCAG ATGTTTCGCC
GCCATGCGCT ACTTACTCGT CGAAGATAAC GATCAGCTGG CCAATGCGGT GCTCGATAGG
CTCACGCTGG ACGGACATGT TGTGGACCGG GCACCGGACC TTGGTACGGC GGATGATTTT
ATGGCGACCA CGGAATACGA CATGATCCTG CTCGATATCA TGCTGCCGGA TGGCGATGGG
CGGCAGTTCC TGCAGGCGCA TCGAGCTGCA CAACGGGATA CACCTGTGAT TGTATTGACC
GCACGTTCTG AAGTTTCGGA CCGGGTCAGT GTCCTGGATC TCGGCGCCGA TGATTATATC
GTCAAACCCT TCGATTTTTC CGAACTTGAG GCCCGGTGCC GGGCCGTACA ACGCCGCAGA
TCCGGGGGAG CCAGCAATAT TCACAGCTTT GGCGATGTGG TATTCGATCC TCTCGCCTGC
ACCCTGACAG TGAACGGACG CGAGGTGCGA CTTCGCAACC GGGAATTGCG CCTCTTTGAG
ATCTTCATTG CGGCCCCCGA TCAGGTTTTC TCCAAATCCA AGCTGGTGGA TCGGCTGTTT
TCCTACGACG TCGATGCTTC TGAAAACGCG ATCGAAGTCT ATGTCGGACG GCTGCGCAAA
CACCTTGAAG GGGCGCGGGC GCAAATCGTC ACCGTGCGTG GGCTGGGCTA CCGGCTGAGC
CTCTCATGA
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| Protein sequence | MNHGIPAQAD TNLTRSRCFA AMRYLLVEDN DQLANAVLDR LTLDGHVVDR APDLGTADDF
MATTEYDMIL LDIMLPDGDG RQFLQAHRAA QRDTPVIVLT ARSEVSDRVS VLDLGADDYI
VKPFDFSELE ARCRAVQRRR SGGASNIHSF GDVVFDPLAC TLTVNGREVR LRNRELRLFE
IFIAAPDQVF SKSKLVDRLF SYDVDASENA IEVYVGRLRK HLEGARAQIV TVRGLGYRLS
LS
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