| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2713 |
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| Symbol | |
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| ID | 4077020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2857581 |
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| End bp | 2859170 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638008038 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_614707 |
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| Protein GI | 99082553 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACACC TGAAGACAAC TCTGCTCGCC AGCGCCTTGA TGCTGCCGCT TGCAGCCCCT
GCCGTACTGG CTGATACGCC CGAAGGCGTG CTCGTGGTTG CACAGAACAT CGACGATGTC
GTCGCCATCG ACCCGGCGCA GGCCTATGAG TTCACCTCCG GCGAGCTCGT GACCAACCTC
TATGACCGTC TGGTGCAATA CGATGCCGAA GACACCACCG TTCTGGCCGC AGGTCTGGCC
TCGGAATGGG TCACCGATGC GGATGCCAAG ACCATCACTT TCACCCTGCG CGATGGGGCG
ACCTTTGCCT CTGGCAATCC CGTGACCGCA GAAGATGTGG TCTATTCCTT CTCCCGCGTG
GTGAAGCTGA ACCTGACCCC GGCGTTCATC CTGACTCAAC TGGGCTGGAC GGCAGATAAC
ATCGGCGAAA TGGTCACGGG CGAGGGCAAC ACCGTCACCG TGAAATACGC CGGCGACTTC
TCTCCGGCGT TTGTACTGAA CGTCCTGGCG GCACGTCCTG CCTCCATCGT CGACAGCAAG
CTGGTGCAGG AAAACGAAGT TGACGGCGAC ATGGGCAATG CCTGGCTCAA CGCCAATGCC
GCCGGTTCTG GCCCCTTCAC GCTGCAACGC TATGCGGCGG GTCAGATGGT GCGCATGCAG
GCCAATCCGA CCTATTTCAA CGGCGCGCCC AAGATCGACA GCGTGATCAT CCGCCATGTG
GCCGAAAGCG CGACCCAGCA GCTTTTGCTG GAGCAGGGCG ACGTGGATCT GGCCCGCAAC
ATGACACCCG ATCAGGTGGC TTCCCTTGAA AGCGGCGAGA TCAAGGTCGA GACATACCCG
CAGGCGGCTG TGCATTTCCT GTCGTTCAAC CAGAAGACCG AGAGCCTTAC GCCCCCCGCC
GTTTGGGAAG CCGCGCGCTA TCTGGTGGAC TACAAGGGCA TGACCGAGAC CATCATCAAA
GGTCAGATGG AAGTCCACCA GGCGTTCTGG CCCAAGGGCT TCCCCGGTTC CTATGACGAA
ACGCCGTTCT CTTATAACCC GGAAAAAGCC AAGAGCATTC TGTCCGAGGC CGGGATCGAG
ACCCCGATCA CCGTGTCGCT CGACGTGATC AACGCCGCGC CCTTTACCGA CATGGCGCAA
TCGTTGCAGG CGAGCTTTGC CGATGCGGGC ATCAACTTTG AGATCCTGCC CGGCACCGGC
AGCCAGGTCA TCACCAAGTA CCGCGAGCGC AGCCATGAGG CGATGCTGCT GTACTGGGGC
CCGGACTTCA TGGATCCGCA CTCCAACGCC AAGGCCTTCG CCTATAACTC CAACAACGCA
GACGACTCCT ATGCCGCCAC AACCACATGG CGCAATGCAT GGGCCGTGCC GGATGCGCTC
AACGAGAAAA CCATGGCGGC TCTGACCGAG AGCGACGCCG AGGCCCGTCT CAACATGTAT
CGCGAGCTGC AAAAAGAAGT GCAGGCCGAG TCGCCCATCG TGATCATGTT CCAGGCCGCC
TATCAGGTTG CCATGAACGA GGCCGTTTCT GGCTATGTGA ACGGCGCCAC CTCGGATTTT
GTCTTCTACC GTCTGGTTGA AAAACAGTAA
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| Protein sequence | MKHLKTTLLA SALMLPLAAP AVLADTPEGV LVVAQNIDDV VAIDPAQAYE FTSGELVTNL
YDRLVQYDAE DTTVLAAGLA SEWVTDADAK TITFTLRDGA TFASGNPVTA EDVVYSFSRV
VKLNLTPAFI LTQLGWTADN IGEMVTGEGN TVTVKYAGDF SPAFVLNVLA ARPASIVDSK
LVQENEVDGD MGNAWLNANA AGSGPFTLQR YAAGQMVRMQ ANPTYFNGAP KIDSVIIRHV
AESATQQLLL EQGDVDLARN MTPDQVASLE SGEIKVETYP QAAVHFLSFN QKTESLTPPA
VWEAARYLVD YKGMTETIIK GQMEVHQAFW PKGFPGSYDE TPFSYNPEKA KSILSEAGIE
TPITVSLDVI NAAPFTDMAQ SLQASFADAG INFEILPGTG SQVITKYRER SHEAMLLYWG
PDFMDPHSNA KAFAYNSNNA DDSYAATTTW RNAWAVPDAL NEKTMAALTE SDAEARLNMY
RELQKEVQAE SPIVIMFQAA YQVAMNEAVS GYVNGATSDF VFYRLVEKQ
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