| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2707 |
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| Symbol | |
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| ID | 4077014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2851063 |
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| End bp | 2852646 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008032 |
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| Product | xanthine/uracil/vitamin C permease |
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| Protein accession | YP_614701 |
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| Protein GI | 99082547 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2252] Permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.458027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGATG GGAGTTATAC CTACAAGCTG TTTCACCGCA GCGACTTTAG CGCGTTCTGG
GCGCTGTTCA CCGACAACCT TGTCAATCTG ATGGTGCTTG CGGGCATCTG TCAGTTCGTT
TTTCAGATGC CTGCCGATAT CGTCTATGGC CGTATCGTTC CAGGTGCGGG TGTAGCGATC
CTTGCCGGGA TCGTCGCCTA TGTGGCGCTT GCCAAACGTG CCGCGCAGGC GCACGGGCGC
GATGTCACCG CCCTGCCCTA TGGCATCTCC ACACCGGTGA TGTTTGTCTA TCTCTTTGGC
GTGATTGGTC CGATCTACTG GGCCACCAAT GATCCGCTGC TGGCCTGGCA GGTTGGCATT
GGGGCCGGAT TCATGGGCGG GATCGTGGCT GCGCTGGGCG CTGTGGTCGG TCCGTGGCTC
AAACGTGTGA CACCGCGTGC GGGTATGCTC GGCACGCTCT GCGGGATTGC GCTTGTGTTT
ATCGGCTCGG TACCGCTGGC GACCGTGTTC GAGAACCCGT TCATCGGCTT TGCATCGATG
ATCATCATTC TCTGGGGCCT CGTGGGGCGA TTTCGCCTGC CCTACAACAT TCCTGCGGGC
CTTCTGGCAC TCATCGTCGG CACCTTGGTG GCGCTGATGC TGGGCACCTC GACCCTCAGC
CTTGAGGGCA TCGGGTTCTA TCCGCCCCTG CCCTATCTCG GCGATCTCAT TGCGGGCGTT
CAGTATCTCT TTGCCAATCC CGAGCTGTTC CTGGTGCTGG TGCCAGTACA GATCTACAAC
TTCATCGAAA CCATGAACAA CGTCGAGAGC GCCGAGGCTG CGGGCGATCA CTACCCGGTG
GCCACCTGCC AGATCACCGA TGGCGTCGGC ACCATGATCG GTGCGGTCTT TGGCTCGCCG
TTTCCCACCA CGGCCTATAT CGGCCACCCG GCCTACAAGC GCATGGGCGC GCATGCGGGC
TATATCATCG GCGTGGGCGC GGTGATCCCG CTGGCGGCGA TCTTTGGTTT GCTTGCGTTT
CTCAACAACC TGATCCCCGT GGCCGCCGCC GCGCCGGTGC TGGTCTTTGT CGCCTTGAGC
CTGATCACCA ACACCGCCCA TTCGGTCAAG ACCGAGCATA TGGCGGCCGT GACCATCGCG
ATGATGCCGC ATGTCTCGGC ATTTCTGATG GTGAAATGGG CAGCGCTGAT CGGCGCGCTG
GGTGCCGTGG GCGTCGCGGG TGTGCCGCAG CTGGGCGATG AGGCACTCAC CTCTGCGCTG
CTGCAGCAGG GAGCTCATTT CAGCGGTCAT CTGTCGCTCT CGCAAGGTGC GATCCTGACC
GGGCTGATCT GGGGTGCGAT TGTCGCCTAT GTGATCGATG GCAATTTTCG CGCTGCGGGC
GGCTTTGCGC TTGCGGCCGC GGCAATGTCG GCGCTTGGGA TCATTCATGG CGCGAGCCTG
CATTGGCCAG AGCTGACGAG CGTGTCAGGC GGCTATCTGA TCGCTGCCGC GTTCCTCTTT
ATCTATCCGC TGTTTCACAA GAGCGATGAT CTGGTGAACG CCAATGTGGT GTTGGAAGAC
GCGCCACCGC AAGCCGCCGA ATAG
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| Protein sequence | MRDGSYTYKL FHRSDFSAFW ALFTDNLVNL MVLAGICQFV FQMPADIVYG RIVPGAGVAI
LAGIVAYVAL AKRAAQAHGR DVTALPYGIS TPVMFVYLFG VIGPIYWATN DPLLAWQVGI
GAGFMGGIVA ALGAVVGPWL KRVTPRAGML GTLCGIALVF IGSVPLATVF ENPFIGFASM
IIILWGLVGR FRLPYNIPAG LLALIVGTLV ALMLGTSTLS LEGIGFYPPL PYLGDLIAGV
QYLFANPELF LVLVPVQIYN FIETMNNVES AEAAGDHYPV ATCQITDGVG TMIGAVFGSP
FPTTAYIGHP AYKRMGAHAG YIIGVGAVIP LAAIFGLLAF LNNLIPVAAA APVLVFVALS
LITNTAHSVK TEHMAAVTIA MMPHVSAFLM VKWAALIGAL GAVGVAGVPQ LGDEALTSAL
LQQGAHFSGH LSLSQGAILT GLIWGAIVAY VIDGNFRAAG GFALAAAAMS ALGIIHGASL
HWPELTSVSG GYLIAAAFLF IYPLFHKSDD LVNANVVLED APPQAAE
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