| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2706 |
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| Symbol | |
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| ID | 4077013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2850143 |
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| End bp | 2850994 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638008031 |
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| Product | hypothetical protein |
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| Protein accession | YP_614700 |
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| Protein GI | 99082546 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
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| TIGRFAM ID | [TIGR02964] xanthine dehydrogenase accessory protein XdhC |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.174742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCAG AGCAGCTTCG TGCATTTCTT GACGCCCCGG GCCCGGTTGC GAGCCTGCGG
CTCACGAGGG TTCGCGGGTC CTCTCCGCGC AACACGGGCA CCGAGATGTA TGTGCGTGCT
GATGCGCTCT TTGGCACCAT CGGCGGTGGG CAGCTCGAAC ATCTCGCGAT AGCGGAGGCG
CGCAAGCTGC TAGCGGCAGG CAACCTCTCG GACCATCTGG ACGTCCCCCT TGGCCCCGAG
ATCGGGCAAT GCTGTGGCGG ACGGGTGGAG ATCGCGATCA CCCGGATGAG TGCAAGCGAC
AAGGACGCCG CCCTGCGCGC GACTGAAGCG CAGGATAACG CTCTGCCTGC TGTCTATATC
CTCGGCGCGG GCCATGTGGG CCGCGCACTA GCGGATCTGC TCCAGCATCT GCCGGTGCGC
ACAGTGCTGA TCGACCAGCG TCAGGAAGAG CTGGACCAGT CGAGCGCGCA GGTCGAGCGC
CGCCAGAGCG CGATCCCCGA GATCGACGTG ATGAATGCCC CCGAAGGCAG CGCCTTTATC
GTGCTGACCC ATGACCACGG GCTGGATTTC TTGCTTACCT CTGCCGCCCT GCAACGGGGC
GATGCCACCT ATGTCGGCAT GATCGGCTCT GCCACCAAGC GGGCGAAATT CGCCAGCTGG
ACCCAAGACC ACTGCGACGG GCTCTCTGTC GCAGATCTGA TCTGCCCCAT CGGGGCAGGC
GGTAGCCGCG ACAAGCGGCC CGCCGTGATC GCCGCACAGG TTGCGGCAGA AGTGATCACG
GCACTGACCT CTGAAACTGC CGCAGACCAC CCCCAGACCG GGGGGACTGC CCTGCATATC
GCAGCGCAGT AG
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| Protein sequence | MQAEQLRAFL DAPGPVASLR LTRVRGSSPR NTGTEMYVRA DALFGTIGGG QLEHLAIAEA
RKLLAAGNLS DHLDVPLGPE IGQCCGGRVE IAITRMSASD KDAALRATEA QDNALPAVYI
LGAGHVGRAL ADLLQHLPVR TVLIDQRQEE LDQSSAQVER RQSAIPEIDV MNAPEGSAFI
VLTHDHGLDF LLTSAALQRG DATYVGMIGS ATKRAKFASW TQDHCDGLSV ADLICPIGAG
GSRDKRPAVI AAQVAAEVIT ALTSETAADH PQTGGTALHI AAQ
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