| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2703 |
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| Symbol | |
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| ID | 4077010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2845236 |
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| End bp | 2846147 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638008028 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_614697 |
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| Protein GI | 99082543 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.637197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTATA TGGAGAGCCT GCGCCTGTTC TGCCGTGTGG TGGAGCTGGG CAGTATCACA
TCGGGAGGGC GCGACGTGCG CCTGACGCCG GCAGTGGCCA GCAAACGCAT CAAGGAGCTG
GAGGAACATC TTGGCGTGCG GCTCTTCAAT CGCACCACGC GATCGCTGAC GCCGACCGAA
GCGGGTAAGC GGTTTTACCG CGAGGCCTTG CGCATCCTTG ACGTGGTCGA AGAGGCCGAG
AGCGTTGTGG CACAGTTCTC CGGGCGGCCA CGCGGGACTC TGAAAATCAC CGCACCTCTG
GCAGCTGGAC GGCGCATAAT CGCCCCGTTA GTGCCTGATT TTGTCGATCG GCACCCCGAG
ATCGACGTGC AGATGCGGAT GTCGGATCGT CGGGTCGATA TTCTGGCAGA AGGTCTGGAC
CTGGCCTTTT TTGTCGGTAC GCCGAGCGAC TCCAGCCTGA AGATGCGCAA GATCGCAAGC
GTTGACCGGG TGCTCTGTGC CTCGCCGCGC TATCTGGAAC GCCATGGCAT CCCTCATGTG
CCGCAGGATC TGATGGGAAA ACACAACTGC CTGCTGCTGC GCTACCCCCG TTCGCCAGAA
TATTTTTGGA CCTTGAACAC AGGCTCTGGG TTTCGAAAAT TCGAAGTCAG CGGCAAATAC
GATGCAGACG ACAGCGAGGT TCTGTTGAAT TGGGCGCTGG ATCATCGCGG CATCGTCAAC
AAACCACGAT TTGAGGTGGC AGAGCATCTG CGCTCTGGTG CGCTGGTCGA GATCCTGCCG
GAGGCGCGCC CGATGGCGGC AACTTTCGGC TGCCTTTATC CGCACAAGAA ACTGCAGGAT
CCAAAAGTGC GCCTGCTGGT GGATTTCATC ACCGAACGCG GACAGTCCTT GCTGGACGCG
CTGGTCGGAT AA
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| Protein sequence | MAYMESLRLF CRVVELGSIT SGGRDVRLTP AVASKRIKEL EEHLGVRLFN RTTRSLTPTE
AGKRFYREAL RILDVVEEAE SVVAQFSGRP RGTLKITAPL AAGRRIIAPL VPDFVDRHPE
IDVQMRMSDR RVDILAEGLD LAFFVGTPSD SSLKMRKIAS VDRVLCASPR YLERHGIPHV
PQDLMGKHNC LLLRYPRSPE YFWTLNTGSG FRKFEVSGKY DADDSEVLLN WALDHRGIVN
KPRFEVAEHL RSGALVEILP EARPMAATFG CLYPHKKLQD PKVRLLVDFI TERGQSLLDA
LVG
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