| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2701 |
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| Symbol | |
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| ID | 4077008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2842959 |
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| End bp | 2844122 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008026 |
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| Product | D-3-hydroxyaspartate aldolase |
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| Protein accession | YP_614695 |
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| Protein GI | 99082541 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3616] Predicted amino acid aldolase or racemase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.75052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.463179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAC CCGCAAATTT CGACAGCCTC GAAGTGGGCT TTGACGTCCC CGCCCTGCCC
GGCATGGATG AGGCCGACAT CCAGACCCCC TGTCTGGTGC TCGACCTCGA CGCGCTGGAG
CGCAACATCA AGAAGATGGG CGATTACGCC CGCGCGCACG GCATGCGCCA CCGCGTGCAT
GGCAAGATGC ATAAATCGGT GGATGTGGCC AAACTCCAAG AGCGTCTTGG TGGCGCAATC
GGGGTCTGCT GCCAGAAGGT CTCTGAGGCC GAAGTCTTTG CACGAGGCGG CATAAAGGAC
GTGTTAGTGT CTAATCAGGT GCGCGATCCG GCCAAGATCG ACCGGCTGGC GCGGCTCCCG
AAACTGGGCG CGCGTACCAT CGTCTGTGTG GATGATCCGG CCAATGTCGC GGATCTGTCA
GCAGCGGCAC AGAAGCATGA CACCGAGATC GAGTGCTTTG TGGAGATCGA CTGTGGCGCT
GGACGCTGCG GCGTGACCAC CACGGAAGAC GTGGTCGAGA TCGCGCAGGC CATTGATGCC
GCCCCGGGGC TAAAGTTCAC CGGCATCCAA GCCTACCAGG GCGCCATGCA GCACCTCGAC
AGCTACGAGG CGCGCAAGGA AAAGCTCGAC GTTGCAATCG CTCAGGTGCG TGATGCGGTC
GAGGGGCTGA AGGCTGCGGA TCTTGCGCCG GAATTGGTCT CTGGAGGCGG TACAGGCTCT
TACTACTTCG AGTCTAACTC AGGGGTTTAT AACGAATTGC AGTGTGGCTC CTACGCGTTC
ATGGATGCCG ACTATGGCCG AATTCTGGAC CAGGACGGCA AGCGGATCGA CCAGGGCGAG
TGGGAGAATG CCTTCTTCAT TCTGACCCAG GTCATGAGCC ACGCCAAAGC TGACAAGGCG
ATCTGTGATG CGGGCCTCAA GGCGCAATCC GTGGACAGCG GACTGCCGTT CATCTTTGGT
CGCACGGATG TCGAATACGT CAAATGCTCG GACGAGCATG GGGTGATAGC TGACCCCGAT
GGCGTGCTGA AGGTGGGCGA GAAACTGAAG CTGGTCCCCG GCCATTGTGA TCCCACCGCG
AATGTCCACG ACTGGTACGT CGGCGTCCGC AACGGCAAGG TCGAAACCCT CTGGCCAGTG
TCCGCGCGCG GCAAGGCCTA CTGA
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| Protein sequence | MNAPANFDSL EVGFDVPALP GMDEADIQTP CLVLDLDALE RNIKKMGDYA RAHGMRHRVH
GKMHKSVDVA KLQERLGGAI GVCCQKVSEA EVFARGGIKD VLVSNQVRDP AKIDRLARLP
KLGARTIVCV DDPANVADLS AAAQKHDTEI ECFVEIDCGA GRCGVTTTED VVEIAQAIDA
APGLKFTGIQ AYQGAMQHLD SYEARKEKLD VAIAQVRDAV EGLKAADLAP ELVSGGGTGS
YYFESNSGVY NELQCGSYAF MDADYGRILD QDGKRIDQGE WENAFFILTQ VMSHAKADKA
ICDAGLKAQS VDSGLPFIFG RTDVEYVKCS DEHGVIADPD GVLKVGEKLK LVPGHCDPTA
NVHDWYVGVR NGKVETLWPV SARGKAY
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