| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2697 |
|---|
| Symbol | |
|---|
| ID | 4077004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2838703 |
|---|
| End bp | 2839605 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 638008022 |
|---|
| Product | PRC-barrel |
|---|
| Protein accession | YP_614691 |
|---|
| Protein GI | 99082537 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.289885 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.809091 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCC TGTTGATGTC GACTGCCCTG ATGGCAGCCA CCTCCACCGT TGCGGTTGCC
GAAACACCAA AGTTCATGGC GAGCGCGGAT CCCTTGGCGA TCCAGGCGTC TGAATTCATC
GGTCAGCAGA TCTACACCAC CCCGTCCGAG GTCGATGCCG AAGGGTATGA GGGTCTCCAG
CAAGAGTGGC AGAAGATCGG CGAGGTAAAT GACATCGTGC TGAGCCGTGA CGGCAATATC
CAGTCGGTTC TCGTCGACAT CGGCGGCTTT CTCGGGATTG GCGAACGTCA GATCGCGGTG
GATATGAACG TGCTGCAAAT GGTGCCGGAT AGCGCGACGC CCGAAGACAG CACCGATTAT
TTTCTGGTGA TGCAGGCGGA TGTTGCGGAG TTTGAAACTG CACCGGCTTA TGAGCACTCC
GGGATGAGTG ATTTCAGCGA TCGCGCCGAA CAAGCGGTGA AAACCACTTC GGCGGCGTTG
AAGAACACGG CCGATGATCT GGGCAACACT GCTCAAGGCG TGGCCGAGCG GGTCGGAGAG
GCGATCAGCA ACACGATGGA CGACGTGAAA GAGATCACAG CCGAGGTCAC TTCGGATTGG
CAAGACAAAG GCTATGAACC CATCGAGGGT GCCAATCTCA GCGCCGAGCG CCTGACCGGA
ACGCCCGCCT ATGGCATCAA GGATGACTGG ATTGGTGAGG TCTCTGACCT TGTGATGAGC
GAATCCGGAG ACATCAGCCA TGCGATCATC GATGTGGGCG GCTTCCTCGG GATTGGCGAA
ACGCCAGTAA AGCTTGAGCT GTCCCAAGTC ACCGTCCTGC AAGAAGTCGG AGGGGATGCA
CTGCGCGTCT ATGTGCCAAT GTCCAGCGAC AAGCTGAAAG GCATTGGCGC CTACGAGAGC
TGA
|
|---|
| Protein sequence | MKTLLMSTAL MAATSTVAVA ETPKFMASAD PLAIQASEFI GQQIYTTPSE VDAEGYEGLQ
QEWQKIGEVN DIVLSRDGNI QSVLVDIGGF LGIGERQIAV DMNVLQMVPD SATPEDSTDY
FLVMQADVAE FETAPAYEHS GMSDFSDRAE QAVKTTSAAL KNTADDLGNT AQGVAERVGE
AISNTMDDVK EITAEVTSDW QDKGYEPIEG ANLSAERLTG TPAYGIKDDW IGEVSDLVMS
ESGDISHAII DVGGFLGIGE TPVKLELSQV TVLQEVGGDA LRVYVPMSSD KLKGIGAYES
|
|---|
| |