Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2696 |
Symbol | |
ID | 4077003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2837919 |
End bp | 2838587 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638008021 |
Product | CHAP |
Protein accession | YP_614690 |
Protein GI | 99082536 |
COG category | [R] General function prediction only |
COG ID | [COG3942] Surface antigen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.283548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.55388 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGGGC GCGCCTTGGG TGATTGGCGA AATCTTGCCA CCGGGCAACA GGCATATTGG CACACACGGC TTTTTGACAG AATGTTACGC CGCATCACGA ATGTCACAAC AACGCCAGAG TGTCCCTTGC AAACCATTGC CCGCACCCTC CGTCTGAACC CGATCCTGAG TGGACTTCTT CTGATTTCAG CGCTGGCCCT CAGCGCCTGC GGAGAAGGGC CGCGGTCGGG CAATGATCAG ATCGATCCGG CACGCCTGGC CTTTGCCATG CGTGAGGCGG AGAGCCTGCG GTCGCGCGGC GCCCGCGTCT GGTGTGTGCC TTTTGCGCGC AACCTCTCGG GCGTGGAAAT CCGCGGCAAT GCCCGCACCT GGTGGAAACA GGCGCAGGGT CGCTTCGAGG TTGGCAAGAC TCCCGAAGTG GGTGCGGTCA TGGCCTTTAG CGCCACCCGC TCGATGCCGC TTGGCCATGT CGCCGTTGTG TCTGAAGTGG TTGATGATCG CACGCTGCGC ATTGATCACG CCAATTGGCA CCGCAACAAG GTTTCGCTCG GCATGGCGGT GATTGATGTT TCAGATAGAA ACGACTGGTC GCGCGTCCGC GTCGAGACCA ATCCCGGCGC ATTTGGCAGC GTTTATCCGA TCAACGGCTT CATTCACCCC AACTCCTGA
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Protein sequence | MQGRALGDWR NLATGQQAYW HTRLFDRMLR RITNVTTTPE CPLQTIARTL RLNPILSGLL LISALALSAC GEGPRSGNDQ IDPARLAFAM REAESLRSRG ARVWCVPFAR NLSGVEIRGN ARTWWKQAQG RFEVGKTPEV GAVMAFSATR SMPLGHVAVV SEVVDDRTLR IDHANWHRNK VSLGMAVIDV SDRNDWSRVR VETNPGAFGS VYPINGFIHP NS
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