| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2683 |
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| Symbol | |
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| ID | 4077594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2821249 |
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| End bp | 2822205 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638008008 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
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| Protein accession | YP_614677 |
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| Protein GI | 99082523 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase
[COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0158942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGG CACTGAAACT CACCAACCTC AGCAAGACCT TCCCGGTGGG CAAACGCCTG
TTCGGCGGAG CCAAGGCGGG CGTCAAGGCG GTGCAGCCGC TCTCGCTGAC GGTGGAACAG
GGCGAAACCC TCGGCATCGT GGGGGAGTCG GGGTGTGGCA AATCCACATT GGCGCGGATG
CTGGTGGGCT TGCTGCCGCC GACAACCGGC CAGATCGAGC TCGAAGGCGC ACCGCTTGAT
AATGCGGACC CGGCCACCTT TGGGCAGAAG ATCCAATATG TGTTTCAGGA CCCGATCAGC
AGCCTCAACC CGCGCAAAAC CATTCGCCAG GTGATGGACG CGCCCCTGCG GCATCTGCAC
GGTATGGATG CCAAGGCGCG CGCGGCGCGC ATCGCCGAGA TCTTTGCCGC CGTAAACCTG
CGCGAAGAGT TTCTCGACCG CTACCCGCAT GAATTCTCCG GTGGTCAGGC CCAGCGGATT
GGCATTGCCC GTGCCCTTGC GGCGGATGCG CGGATCCTGA TCCTTGATGA ACCTGTCTCG
GCGCTGGATG TCTCGGTACA GGCGCAGGTG CTGAACCTCT TGGCGGATCT GAAGCGGACC
TTCGGCCTGA CCTATATTTT CATCAGCCAC GATCTCGCGG TGGTGGAGGC GGTGAGCGAC
CGTGTCGCGG TGCTCTATTT TGGCTCCGTG GTGGAGGTTG GTCCCGCCAA TGAGGTGTTT
GCCGCGCCCC GACACCCCTA CACGCGGCTT CTGGCTCAAA GCGCCCCGGT GGTAGGCCGC
GCTCTGGCCG CGCCCGAGGC CAAAGAGACC GAATTGCCGG ATCCTCTGAA CCCGCCCAAA
GGCTGCGCTT TTGCGGCGCG CTGTGCCCTT GCGAGCGACC TTTGCCAAAG CACCGCCCCG
ACGCTCGAGC CCCAGTCCGA TCGCGTCGCG GTCGCCTGTC ATCACCCCAT TGACTGA
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| Protein sequence | MSAALKLTNL SKTFPVGKRL FGGAKAGVKA VQPLSLTVEQ GETLGIVGES GCGKSTLARM
LVGLLPPTTG QIELEGAPLD NADPATFGQK IQYVFQDPIS SLNPRKTIRQ VMDAPLRHLH
GMDAKARAAR IAEIFAAVNL REEFLDRYPH EFSGGQAQRI GIARALAADA RILILDEPVS
ALDVSVQAQV LNLLADLKRT FGLTYIFISH DLAVVEAVSD RVAVLYFGSV VEVGPANEVF
AAPRHPYTRL LAQSAPVVGR ALAAPEAKET ELPDPLNPPK GCAFAARCAL ASDLCQSTAP
TLEPQSDRVA VACHHPID
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