| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2674 |
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| Symbol | |
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| ID | 4077585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2809876 |
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| End bp | 2810637 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638007998 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_614668 |
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| Protein GI | 99082514 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCA CCGACCTGAG CGAGAGACAG CGCGATATTC TGCGGCTGCT GGAGCAAAGC
GGCTTTGCCA CCATCGAGGA TCTGGCGGGG CGTTTTGGCG TCACCACACA GACCATCCGC
CGCGATGTCA ACGACCTGCG CGACCGGGCA CTGCTGATGC GGGTGCATCG GGGCGTCAGG
CCGCATGAGG GCGCGCGGCC TTATGCCTCG CGCGCTGTGG AGCAACAGCG TGAGAAGGCC
GCATTGGCGC GCGAGGTGCT GCGGCTCATT CCGGCGGGGG CGTCGGTGTC GATCGGTCTT
GGCAGCACCC CGGCAGAGGT GGCGCGGCTT TTGGCCCATG CGGGCGGGCG TGACGTCATC
ACCAACAATC TGGTGGCGGC AAGCCATCTG TGGGACGCCG AGGACATCAC CCTATCGATC
TGCGGCGGCG CCGTGCGCGA TCGCAGTGTC TCGGGCAGTG CGGCGGCAGA GTTCTTTGCC
GCCTACCGCG TGGATTTTGC GATCTTTGGC GTGGCGGGTG TGGATGACGA CGGCGCGCTT
TTGGATTTTC GCACCGAAGA GGCACGCGCG CGGGCCGCGA TGCAAACCCA CGCACGGCAG
TCGGTTCTGG TGCTCGATCA GGTCAAGTTC CAGCGCCGCG CGCCGGCGCG GGGCGGTTGG
CTCCACGATC CCGATTATGT CGTCACAAAT GCGCCGCCCC CAAAAGCCCT CGCTGCTGGG
CTCTGCGCGG GGGCCTTGGT GCTGATATCG GAAGCGCCCT AG
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| Protein sequence | MNATDLSERQ RDILRLLEQS GFATIEDLAG RFGVTTQTIR RDVNDLRDRA LLMRVHRGVR
PHEGARPYAS RAVEQQREKA ALAREVLRLI PAGASVSIGL GSTPAEVARL LAHAGGRDVI
TNNLVAASHL WDAEDITLSI CGGAVRDRSV SGSAAAEFFA AYRVDFAIFG VAGVDDDGAL
LDFRTEEARA RAAMQTHARQ SVLVLDQVKF QRRAPARGGW LHDPDYVVTN APPPKALAAG
LCAGALVLIS EAP
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