| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2653 |
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| Symbol | |
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| ID | 4077956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2787233 |
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| End bp | 2787934 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007977 |
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| Product | putative transcriptional regulator, CadC |
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| Protein accession | YP_614647 |
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| Protein GI | 99082493 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGACG CAACTTTCTC CGTTTCTGAG GTCCGCCACG CCGGGTCCCG GGTGATCGCG
CTTGGGATTG GCGCCATTGT GGCCCTTCTG GTCGTCGCGG GCACGGTGCT GCTTCTGACC
CTGCCGGACG GCAATGCGTT CAATGCCCGC ATTGAACGGC TCTTTGTGGA AAACGACCTC
ACCACCCAGG CCGAGATCAA GCTGCTGGAG ATCCTCGCCC AGAGCGGCAC CGCCTTTGCC
GACACGCTGG CAAGCTACCG TATGGTGATC TTTGTGCTTT TGGTCTTTGC CACCGCGATG
ATGATTGCCG CCCTCGTGGT GCTGGCAATG CTGGTGATGC TGAACCGGCG CATGGCGCAG
ATCGAACGTG CCGGGATTCA GGTGACGGAA CTGCTGATCA GCCGCGAGGA AAACACCGTT
TACCTCAACA ATATGGGCTT CAAGCTCACC CAGGCCGCGA TGGAGACGCT CTCCGTCCTC
GCCGAGGCGC GGCTTGATGA TGATGTGCTC TCGGGTGCCG AGATCGAGGC GGTGATTTCC
GGCAAATCCA GCCATGATTG CGAGGAAGCC GCCGGGGCGA CCCGCATCAA ACGGCTGCGC
GACACCCTTG GCAATCAGAT GATCAGCGAG CTGTTGGTGA AGAACATCGC CAAACGCGGC
TATGTGCTGG CGATCAACAA GGATGTGATC CGCATGGTGT GA
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| Protein sequence | MPDATFSVSE VRHAGSRVIA LGIGAIVALL VVAGTVLLLT LPDGNAFNAR IERLFVENDL
TTQAEIKLLE ILAQSGTAFA DTLASYRMVI FVLLVFATAM MIAALVVLAM LVMLNRRMAQ
IERAGIQVTE LLISREENTV YLNNMGFKLT QAAMETLSVL AEARLDDDVL SGAEIEAVIS
GKSSHDCEEA AGATRIKRLR DTLGNQMISE LLVKNIAKRG YVLAINKDVI RMV
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