Gene TM1040_2643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2643 
Symbol 
ID4077946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2777471 
End bp2778172 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content59% 
IMG OID638007967 
ProductDsbA family thiol:disulfide interchange protein 
Protein accessionYP_614637 
Protein GI99082483 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA TCATGACAGG TATCTGCGCG GCCGTTGCCG TTGCAGCGGG CGTATACGCG 
ATCAACAATT TCTCGGGCCG CGAAGACAAC GCAAGCCTTT TGGACATCCA GCTGGTGAGC
GCGGCCAATG CGCAAGAGAG CAGCCAGGGC GCCGAGGCGG CAGAGGTGGA CACCTCCACG
ATCATGGAAA TGGTACAGGG CGCCGAAGAC GCGCCTGTGA CCTTGATCGA ATATTCGTCC
TACACCTGCC CGCATTGCGC GAATTTCCAC GCCGATGCCT ATAAGAAGCT GAAGGCCGAA
TATATCGATA CCGGCAAGGT AAAGCTGGTC TACCGCGAGG TCTATTTCGA CCGCTTTGGT
CTCTGGGCGT CGATGGTGGC GCGCTGTGGT GGCGAAGAAA AGTTCTTTGG CATCACCGAT
CTGATCTTCA AGCAGCAGGC CGAATGGACC CGTGCTGGCG GCCCTGCCGA GATGGTGGAA
GCGCTGAAAA AGATCGGTCG CGTGGCCGGT GTGGACGGCG ACGCGCTGGA GGCCTGCCTG
CAGGATGCCA CCAAGGCACA GACGCTGGTG ACCTGGTATC AGGAGAACGC CACCAAGGAT
GACATCAGCT CGACCCCGTC TTTCATCCTC AACGGCACCA AGATCGCCAA CCAGCCCTAT
GAGGATCTGA AGGCGCTGAT CGACGCCGAG CTTGAAGGCT AA
 
Protein sequence
MTRIMTGICA AVAVAAGVYA INNFSGREDN ASLLDIQLVS AANAQESSQG AEAAEVDTST 
IMEMVQGAED APVTLIEYSS YTCPHCANFH ADAYKKLKAE YIDTGKVKLV YREVYFDRFG
LWASMVARCG GEEKFFGITD LIFKQQAEWT RAGGPAEMVE ALKKIGRVAG VDGDALEACL
QDATKAQTLV TWYQENATKD DISSTPSFIL NGTKIANQPY EDLKALIDAE LEG