| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2639 |
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| Symbol | |
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| ID | 4077942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2773042 |
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| End bp | 2774463 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638007963 |
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| Product | microcin-processing peptidase 1 |
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| Protein accession | YP_614633 |
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| Protein GI | 99082479 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.818625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAGA GCCCTTGCGA TACGGCGGCG CTCTGGCTAG CTCTGGTTCA ATGCCACCCA
TTTGCGAAGG TGCCCATGAC ACAGACTCCT GAAACGCTTT GCCACGCCCT CCTTGATGCC
GCCCAAAAGG CCGGGGCCGA TTCTGCCGAC GCCATGGCCG CCGAGGGCAG CTCGCTCTCG
ATCGAGGTGC GCGAGGGCGC GCTGGAACAT GCAGAGCGCT CCGAAGGGGT GGACATCGGG
CTGCGGGTCT TTGTCGGCCA GCGTCAGGCG CAGGTGTCCT CCTCCGATAC CCGCCCCGAA
ACCCTGACCG CGATGGCCGA ACGCGCCGTG GCCATGGCCA AAGAAGCGCC CGAAGATCCC
TATGCCGGGC TTGCTGACCC CGCGCAGCTG GCCAAATCCT GGGATCTCGA CGCCCTTGAG
ATGGCCGACC CCAGCGCCGA GCCTGCGCCC GATCAACTGC AACAGGACGC GCTGGCCGCC
GAAAGCGCCT GCGCCGCCAT CGACGGCATT TCTCAGGTCC AGTCCGCCGC GGCGGGCTAT
GGGCGTCATG ACATCCACAT GGCCGCGAGC AACGGGTTCT CCGGGGGCTA TGCGCGCACC
AGCCGCTCGA TCTCCTGTGT GGGGATTGCG GGCACCGGCA CCGGCATGGA GCGCGACTAT
GACGGCGACA GCCGCATCTA TCAAACCGAT CTGCGCAGCG CCGAAGAGAT CGGGCGCACC
GCTGGCGAGC GCGCCATCGA ACGTGTGAAC GCCCGCCGCC CCAAAACTGG CGCCTATCCC
GTGCTCTTTG ACGAGCGGAT CTCCTCATCC CTCATCGGGC ATCTTCTGGG TGCCGCCAAT
GGCGCGTCGG TGGCGCGCGG CTCCTCGTGG CTCAAGGACA GTCTCGGCGC GCAGATCCTG
CCCGAGGCCT TCTCGGTCAT CGAGGACCCC CTGCGCCCCC GCGTTTCAGG CTCGCGCCCC
TTTGATGGCG AAGGCCTGCC CACGCAGCGC CGCGCGATCG TCGACAAGGG CGTGCTGACC
GGCTGGACCA TGGATCTGGC TTCGGCGCGC AAACTTGGCC TTGAGAGCAC AGGCAACGCC
GCGCGTGGCA TCGGGTCGGT GCCGTCGCCC TCCAACTGGA ACATCGCTCT GACCCAGGGG
CAACAGACCC GCGAAGAGCT GCTGCGCGAC ATGGGCACCG GGCTTCTGGT CACCTCGATG
ATCGGCTCCA CCATCAACCC CAACACGGGC GACTACTCGC GCGGCGCTTC GGGCTTCTGG
GTGGAGAACG GCGAGATCCA GTATCCGGTC AACGAGGTCA CGATTGCCGG GAACCTCCTC
GATATGCTGA AAACGCTGGT CGCCGCCAAC GACGCCCGCA CACATCTGTC GCGGGTGGTG
CCATCGCTTC TGGTAGAGGG ACTGACCCTT GCCGGAGAAT GA
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| Protein sequence | MAQSPCDTAA LWLALVQCHP FAKVPMTQTP ETLCHALLDA AQKAGADSAD AMAAEGSSLS
IEVREGALEH AERSEGVDIG LRVFVGQRQA QVSSSDTRPE TLTAMAERAV AMAKEAPEDP
YAGLADPAQL AKSWDLDALE MADPSAEPAP DQLQQDALAA ESACAAIDGI SQVQSAAAGY
GRHDIHMAAS NGFSGGYART SRSISCVGIA GTGTGMERDY DGDSRIYQTD LRSAEEIGRT
AGERAIERVN ARRPKTGAYP VLFDERISSS LIGHLLGAAN GASVARGSSW LKDSLGAQIL
PEAFSVIEDP LRPRVSGSRP FDGEGLPTQR RAIVDKGVLT GWTMDLASAR KLGLESTGNA
ARGIGSVPSP SNWNIALTQG QQTREELLRD MGTGLLVTSM IGSTINPNTG DYSRGASGFW
VENGEIQYPV NEVTIAGNLL DMLKTLVAAN DARTHLSRVV PSLLVEGLTL AGE
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