| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2638 |
|---|
| Symbol | |
|---|
| ID | 4077941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 2771466 |
|---|
| End bp | 2772980 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638007962 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_614632 |
|---|
| Protein GI | 99082478 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATTT CTTTTGTTCG CAAGCTGGGC GCCGTCGCGC CGGTTCTGCT GATTGCCCAG
GCGGCACATG CTGACGTCAC GGCACAGGAC GTCTGGGCCG ATTGGAAGGA CTACATGTCC
AGCACCGGCT ACGAGATCAC CGCAACCGAA ACCGAAAGCA GCGGCAAGCT CACCGTTTCC
GACATCACCA TGTCGATGGA TGTCGAGGGC GACTCCTTCT CCATGACCAT GGGATCGCTC
GATTTCATCG AGAACGGCAA TGGCACCGTG AACGTCGTGA TGCCCACCAC TTTCCCGATG
TCCTTCAACG TCAACGCAGA TGGCGATGCG ATCTCTGGGG ATCTCCTCTA TACCCACGAC
GGCAGCCCGA TGGTCGTGAG CGGCGACACC TCGGAAATGG CGTATAACTA CACCGGTGCG
ACCTCCGCCA TCAGCCTCGC CAACCTGGTG ATCGACGGCG ATGCTGTGCC CGCAGACGCG
ATCATGCTCA ATGTCAACGT GACCGATATG GTCAGCAACA CGCTGATGAA GATCGGCGAT
GTGCGCTCTT ATTCGCAGAC CATGACCATG GCCTCGGTTG CCTATGACTT CATGTTCCAG
GAGCCCGAAG GGGACGATGG CGCAGCCTTC AACGGCGCGC TGCAGGGGCT TGAGTTCACC
GGTGACATGA CCATCCCCGA GGTCGACGAT CCCAGCGATT TGGCCGCGAT GCTCAAGGCG
GGCATGGCCT ATGTGGGTGG CTTCACCTTC GAATCCGGCA ACACCAATGT CAAAGGCAGC
GACGGTCCGG ATAATTTCGA CTTTCAGACC TCCTCAAATG GCGGCGCTAT CAACATCGGA
CTGAGCCCCG CCGGCTTGAA CTATGACGTG ACCCAGCGTG ACACGACGCT CAACATGATG
GGGTCCGACA TTCCGTTCCC GGTCTCGCTC AGCATGAAAG AAATGGGCAT GAACTTTGCC
ATGCCGCTGA CCAAGTCCGA CGAGGAGCAA GATTTTGCCC TCGGGATCGC GCTGCGTGAA
TTTGCGGTGC CGGACATGCT CTGGGGTCTG ATCGACCCGG CGGGCGAGCT GCCGCGCGAC
CCTGCAAACC TCGTTGTGGA TCTCTCCGGC AAGGGCAAGC TGTTCTTTGA CCTCGTGGAC
GAAGAGCAAA TGGCCGCCGT GGAATCCGGT GAAGAAATGC CGGGCGAGGT AAACTCCCTC
AGCATCAACG AGATCCTGCT CTCGGTTGCG GGTGCCGAAC TGACAGGTGA CGGCGCCTTC
ACCTTTGACA ACACCGACCT CGAGAGCTTT GACGGCATGC CCGCCCCCGA AGGCGAAGCC
AGCCTGAAGT TGGTGGGTGC AAACGCCCTG ATCGACAAGC TGATCGGCAT GGGCCTCGTC
TCCGAGGATG ACGCCATGGG CGCGCGCATG ATGATGGGCA TGTTCACGGT TCCAGCAGGC
GACGACACCG TGACCTCCAA GATCGAAGTC AACGAAGAAG GCCATGTGCT CGCCAACGGC
CAGCGCCTGA AGTAA
|
|---|
| Protein sequence | MSISFVRKLG AVAPVLLIAQ AAHADVTAQD VWADWKDYMS STGYEITATE TESSGKLTVS
DITMSMDVEG DSFSMTMGSL DFIENGNGTV NVVMPTTFPM SFNVNADGDA ISGDLLYTHD
GSPMVVSGDT SEMAYNYTGA TSAISLANLV IDGDAVPADA IMLNVNVTDM VSNTLMKIGD
VRSYSQTMTM ASVAYDFMFQ EPEGDDGAAF NGALQGLEFT GDMTIPEVDD PSDLAAMLKA
GMAYVGGFTF ESGNTNVKGS DGPDNFDFQT SSNGGAINIG LSPAGLNYDV TQRDTTLNMM
GSDIPFPVSL SMKEMGMNFA MPLTKSDEEQ DFALGIALRE FAVPDMLWGL IDPAGELPRD
PANLVVDLSG KGKLFFDLVD EEQMAAVESG EEMPGEVNSL SINEILLSVA GAELTGDGAF
TFDNTDLESF DGMPAPEGEA SLKLVGANAL IDKLIGMGLV SEDDAMGARM MMGMFTVPAG
DDTVTSKIEV NEEGHVLANG QRLK
|
|---|
| |