Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2637 |
Symbol | |
ID | 4077940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2770582 |
End bp | 2771331 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638007961 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_614631 |
Protein GI | 99082477 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCG CGAATAAAAC GATCGTCATT TCCGGTGCAA GCCGCGGGAT CGGGGCCAGT GCAGCAAAGG AATTTGCCGC AGAGGGCGCC AATGTCGTCT TGCTTGCACG CAGTGCGGAC GCGCTGGAGG CGCTGGCGCA GGAGATCGGC GAGAAAGCGC TGGCGCTGGC CTGCGACGTG GCGGATTACG CCGCCGTGGA GGCGACGTTT GCGCGGGCGC GCGATCATTT CGGCAGTCTC GATGTACTGA TTTGCAACGC TGGCATGATC GACCCCATCG CGCGGCTCGA AGAGGCGGAC CCTGCCGGTT GGGCGCAGCT CATCAATGTG AATATCACCG GCGTTTTCAA CATGATGCGT GCTGGTCTGC CGCATCTCAA AGCGGCAGGC GGTGGTGCGG TGCTGACCAT CGGGTCGGGG GCCTCGCAAC GTCCGCTCGA GGGCTGGAGC GCCTATTGCA CCTCCAAGGC CGGGGCGGCC ATGCTCACCG AGGCGCTGCA CCTTGAAGAA GGCGAGAATG GCATCCGCGT GATGGGGCTC TCGCCCGGTA CGGTGGCCAC GCAGATGCAG CGTGAGATCA AGGCCAGCGG CATCAACCCG GTGAGCCAGC TGGCCTGGGA AGATCACATT CCCGCCGAAT GGCCCGCGCG CACGCTGATG TGGATGCTGA GCGCGGATGC GGATGAATTT GTGGGCACCG AGATCGCGCT GCGCGATGAA GGCATCCGCA AACGGGTTGG TCTCATATGA
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Protein sequence | MKFANKTIVI SGASRGIGAS AAKEFAAEGA NVVLLARSAD ALEALAQEIG EKALALACDV ADYAAVEATF ARARDHFGSL DVLICNAGMI DPIARLEEAD PAGWAQLINV NITGVFNMMR AGLPHLKAAG GGAVLTIGSG ASQRPLEGWS AYCTSKAGAA MLTEALHLEE GENGIRVMGL SPGTVATQMQ REIKASGINP VSQLAWEDHI PAEWPARTLM WMLSADADEF VGTEIALRDE GIRKRVGLI
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