| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2611 |
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| Symbol | trmD |
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| ID | 4077522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2745980 |
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| End bp | 2746780 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007935 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_614605 |
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| Protein GI | 99082451 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.455455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.05547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAC CAACAAAATC CCATGGGCGC CTCTCGATCG GGGCCAGCCT CAAGCCTCGC
GAGTTGATGA GCGACACGCC GGATCTTGCG GGCGTCTGGA AAGCAAAGAT CCTTACGCTC
TTTCCCGAAG CCTTCCCGGG CGTTCTGGGC GAGAGCCTCA CGGGCAAGGC ATTGCAGCAA
GGGCTTTGGC AGCTGGAAAC CGTCGATCTG CGCCCCTTTG GGATTGGCAA GCACAAGAAC
GTCGATGACA CCCCCGCCGG GGGCGGTGCG GGCATGGTGC TGCGCGCCGA CGTACTGGGC
GACGCCATCG AACACGCCAT GCAGGGCACT GCCGGCAACT GGCCTCTGAT TTACCTTTCC
CCGCGCGGGC GGCGGATGGA CCAGCAGATG ATGCAAACCT TTGCCCGGTG CGATGGGCTG
ACACTCCTGT GTGGACGCTT TGAGGGGGTC GATGAACGGG TGCTCGAACA CTACGGCATC
CAGGAGGTCT CGCTTGGGGA TTTTGTGATG ACCGGTGGCG AGCTTGCGGC GCAGGCGCTC
ATTGATGCCA CCGTACGGCT CATTCCCGGC GTGCTGGGCA ACCAGGCCTC CACCGAAGAG
GAGAGCTTCT CCTCGGGTCT TCTCGAACAT CCCCAATACA CGCGTCCTGC CGACTGGAAA
GGCCGCGCGA TCCCCGATGT TCTGATGTCC GGCCACCATG GCAAAATCGC CGAGTGGCGG
CAGGACATGA GCGAAAAGAT CACCCAAGAA CGCCGCCCGG ATCTGTGGGC GGCGTATCAG
GCGCGCAAGT CCAAGACCTG A
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| Protein sequence | MSKPTKSHGR LSIGASLKPR ELMSDTPDLA GVWKAKILTL FPEAFPGVLG ESLTGKALQQ
GLWQLETVDL RPFGIGKHKN VDDTPAGGGA GMVLRADVLG DAIEHAMQGT AGNWPLIYLS
PRGRRMDQQM MQTFARCDGL TLLCGRFEGV DERVLEHYGI QEVSLGDFVM TGGELAAQAL
IDATVRLIPG VLGNQASTEE ESFSSGLLEH PQYTRPADWK GRAIPDVLMS GHHGKIAEWR
QDMSEKITQE RRPDLWAAYQ ARKSKT
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