| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2588 |
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| Symbol | |
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| ID | 4077499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2728243 |
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| End bp | 2729457 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007912 |
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| Product | aminotransferase, class I and II |
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| Protein accession | YP_614582 |
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| Protein GI | 99082428 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000724339 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACTCT CTGCGCAATT TGCATCACGA ATTGGACGGA TGAAAGCATC GGAAATTCGC
GAGCTTCTGA AGCTGTTGGA TCAGCCGGGG ATGCTGTCGT TTGCCGGGGG TATTCCTGAT
CCCGCGCTGT TTCCAGCCGA AGCCTTTGCC GAGGCATTTC AGAATGCCCT TTCGCCCGCG
CATCAGGCGC AATCGCTGCA ATACTCGGTC TCTGAGGGCT ATCTGCCGCT GCGCGAGTGG
CTTGCGACCT ATATGTCCAA ACTTGGTGTG ACCTGTGGAC CAGAGCATAT CCTGATCACC
TCGGGGTCTC AGCAGGCGCT CGACTACCTT GGGAAACTCT TTCTCAGCCC GGGGGATACG
GCGCTTGTCG GCTGGCCCAC CTATCTGGGC GCATTGGCGG CGTTCAACGC GTATGAGCCG
CGCTATGACC GGCTGCGGGC TGGCGAGAAC CAACCCACTG CGCATTACGC TGAGGCTGCC
AAGGCAGCAG GGGGGCGGGT CAAGTTTGCC TATCTCAGCC CCGATTTTGC AAACCCCACT
GGCGAGACGA TGACGCGTGC GGAGCGTCTG CAGGTGCTCG CGACGGCAGA GGCGCTGGAC
GCGGCCGTCA TCGAGGATGC GGCCTATCAG GATCTGCGGT TTGATGGCGC GGCGGTGCCG
CCGATCCTCA CGCTGGAACT TGAGCGCAAC GGAGGCGACA TCGAGTCGTG CCGGACCATC
TATTGCGGAA CGTTTTCCAA GACCCTGTCC CCCGGACTGC GAGTCGGATG GCTGGTGGCG
GCAACGCCTG TTGTTCAGCA ACTCGTGCTG ATGAAGCAGG CCTCTGATCT CCACTCACCG
ACGATCAATC AGATCGCAAC CTGTCAGGTG GCCGAGCAGC TGTTTGACGC CCATGTCGAC
ACGCTGCGGT CGGTCTATGG TCGGCGACGG GATGCTATGC TGGCCGCCCT TGAGGCACAT
ATGCCGGAGG GCGTGATCTG GACCAAACCC GAAGGCGGCA TGTTCATCTG GGTTACCCTG
CCCGAGGGGA TGAGCGGGGC CGAGCTTCTT GAATACGCGC TGAGCCGGGA AAAGGTGGCC
TTTGTCCCCG GTCAGGCCTT CTATGCGGAC GCGACAGGCC GCAATACGCT GCGGCTCAGT
TTTTCAAACA GCAATGAGGC CACAATCGAA GAGGGTGTGG CGCGGCTTGG TCGGGTCATC
CGGAGCATGG TCTGA
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| Protein sequence | MALSAQFASR IGRMKASEIR ELLKLLDQPG MLSFAGGIPD PALFPAEAFA EAFQNALSPA
HQAQSLQYSV SEGYLPLREW LATYMSKLGV TCGPEHILIT SGSQQALDYL GKLFLSPGDT
ALVGWPTYLG ALAAFNAYEP RYDRLRAGEN QPTAHYAEAA KAAGGRVKFA YLSPDFANPT
GETMTRAERL QVLATAEALD AAVIEDAAYQ DLRFDGAAVP PILTLELERN GGDIESCRTI
YCGTFSKTLS PGLRVGWLVA ATPVVQQLVL MKQASDLHSP TINQIATCQV AEQLFDAHVD
TLRSVYGRRR DAMLAALEAH MPEGVIWTKP EGGMFIWVTL PEGMSGAELL EYALSREKVA
FVPGQAFYAD ATGRNTLRLS FSNSNEATIE EGVARLGRVI RSMV
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