| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2584 |
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| Symbol | |
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| ID | 4077495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2721455 |
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| End bp | 2722450 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638007908 |
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| Product | aminotransferase |
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| Protein accession | YP_614578 |
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| Protein GI | 99082424 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000040763 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGAAC GCTCTTCCTT TGCGGCAACG CAAGACCCGG CGCAGGCCTC GGTCTCCGGT
TCCCCCCGCG ATCATGGCGG CAATCTCGCC GCCGCGATCG CACAGTATGG CGGCAGCCGC
GAAGACTGGA TTGATCTCTC CACAGGGATC AACCCTGCAC CCTACCCTCT GCCGCCATTG
CTGGCCGAAG ACTGGACCGC TCTGCCCGAT CAAGATGCCC AGCAGGCTCT GACGGATGCA
GCGCGCCGGT TCTGGCAGGT ACCCGACAGC GCAGAGATCC TTGCCGCCCC CGGCGCTTCG
GCGCTGATTG CACGGCTCCC TGTCCTGCGC CCGGCACGCA GCGTGCAAAT CACGACGCCC
ACCTACAACG AACACGCCGC TGCATTTGAC AATTGTGGCT GGCAGGTGCT TGAGGTGGGT
CCAACGGACG CGCAAGTTGT GGTTCACCCC AACAATCCCG ACGGCCGCCT GTGGCTGCCC
GAGGAACTCA AGGCACCTTT CTGCATCATT GACGAGAGTT TCTGTGACAT CTGCCCGGAG
CGGAGTCTGA TCAACCGCGC AGCACAGCCG GGCACCGTGG TCCTCAAGAG CTTTGGCAAG
TTCTGGGGGC TCGCGGGGCT GCGGCTCGGG TTTGCCATCG GCGATCCGGA GCTCATCGCC
GGACTGCGCG CAGCCATGGG GCCGTGGGCG GTGTCCGGCC CGGCGCTGCG CGTGGGAACG
CACGCTCTGA ACGATCAGAA CTGGGCCGAG GCCAGCCGCC TTGAGCTTGC GGATGGAGCC
TCGCGCCTTG ACCAGCTGAT GCAGCACGCC GGCGCACAGA CCGTAGGCGG CACCGATCTC
TTCCGGCTTT ATGACGTTGA AGATGCCCGC GCCTGGCAGG AGCGCCTCGC GCGTGCGCAC
ATCTGGAGCC GCATCTTTCC CTATTCAACC CGTTTCCTGC GCCTTGGCCT GCCTCCCGCA
GACCGCTGGA GCCAACTGGA GACCGCCCTC ACATGA
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| Protein sequence | MAERSSFAAT QDPAQASVSG SPRDHGGNLA AAIAQYGGSR EDWIDLSTGI NPAPYPLPPL
LAEDWTALPD QDAQQALTDA ARRFWQVPDS AEILAAPGAS ALIARLPVLR PARSVQITTP
TYNEHAAAFD NCGWQVLEVG PTDAQVVVHP NNPDGRLWLP EELKAPFCII DESFCDICPE
RSLINRAAQP GTVVLKSFGK FWGLAGLRLG FAIGDPELIA GLRAAMGPWA VSGPALRVGT
HALNDQNWAE ASRLELADGA SRLDQLMQHA GAQTVGGTDL FRLYDVEDAR AWQERLARAH
IWSRIFPYST RFLRLGLPPA DRWSQLETAL T
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