| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2580 |
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| Symbol | |
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| ID | 4077491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2717810 |
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| End bp | 2718334 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007904 |
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| Product | peptide deformylase |
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| Protein accession | YP_614574 |
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| Protein GI | 99082420 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.341575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000672564 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACGCT CGATCCTGAT CCACCCCGAC CCGCGTCTGA AGAAGATCGC CACCGATGTG
CCGGACCTTT CCGACGACTT GCGCGCGCTT GCCGACGACA TGCTGGAAAC CATGTATGCC
GCGCCCGGCA TCGGTCTTGC TGCGCCGCAA ATCGGCGTTC TGGATCGGCT GATCGTCATG
GACTGCGTCA AGGAAGGCGA GGGTGACGCC CGCCCGCTGG TGATGTTCAA TCCGCGGGTC
ATTGCGTCCT CGGATGAAAC CAACGTCTAC GAGGAAGGCT GCCTCTCCAT CCCTGAGCAA
TATGCCGAAG TGACCCGCCC CAAAGTGGTG GATGTCGAAT GGATGGATCG GGACGGCAAC
CTGCAGACCG AGACATTCGA CGGCCTCTGG GCCACCTGCG TTCAGCATGA AATCGACCAC
CTCGACGGTA AACTTTTCAT CGATTACCTG AAGCCGCTCA AGCGCCAGAT GATCACCCGC
AAGATGCAAA AGCTCAAACG CGAACGCGCG CGCGGCACCG CATGA
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| Protein sequence | MKRSILIHPD PRLKKIATDV PDLSDDLRAL ADDMLETMYA APGIGLAAPQ IGVLDRLIVM
DCVKEGEGDA RPLVMFNPRV IASSDETNVY EEGCLSIPEQ YAEVTRPKVV DVEWMDRDGN
LQTETFDGLW ATCVQHEIDH LDGKLFIDYL KPLKRQMITR KMQKLKRERA RGTA
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