| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2578 |
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| Symbol | |
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| ID | 4077489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2716810 |
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| End bp | 2717307 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007902 |
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| Product | formylmethionine deformylase |
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| Protein accession | YP_614572 |
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| Protein GI | 99082418 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0624462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000631642 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGACCC GCACTTGCTT GCCCTGGCCC GATAAACGAC TGCGCACCAA GGCTGCAGAG
GTGACCGAGA TCACCGATGA GATCCGTGCC ATCTGGGTCG ACATGATCGA TACGATGGAA
GCCATGCCCG GTGTTGGGCT CGCAGCGCCT CAGATCGGGG TGATGCTGCG CCTCGCCGTC
GTGGACGGCT CCAGCGAGCG TGGACGGGCC GTGCGGCTGG CCAATCCGGA AATCCTGCAC
GCCTCGATCG AACTGCGTGA ACACGAAGAG GCGAGCCCGA ACCTTCCCGG CGTCTCGGCC
AAGATCAAAC GCCCCCGTGC GGTGACTGTG CGCTTCCTCA ACGAGGATGG GGTCATCGAT
CGGCGCGATT TTGTTGGGAT CGAGGCCACG TCGGTGCAGC ACCAGATCGA CCATCTGAAC
GGCAAGATGT ATTTCGACCA TCTGTCCAAG GTCAAACGCG ACATGCTGGT CAAAAAGGCC
CGTAAGCTCG CGCGCTGA
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| Protein sequence | MTTRTCLPWP DKRLRTKAAE VTEITDEIRA IWVDMIDTME AMPGVGLAAP QIGVMLRLAV
VDGSSERGRA VRLANPEILH ASIELREHEE ASPNLPGVSA KIKRPRAVTV RFLNEDGVID
RRDFVGIEAT SVQHQIDHLN GKMYFDHLSK VKRDMLVKKA RKLAR
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