| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2571 |
|---|
| Symbol | |
|---|
| ID | 4076702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 2712865 |
|---|
| End bp | 2713323 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638007895 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_614565 |
|---|
| Protein GI | 99082411 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00137712 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000326154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCGCG GCATTCCCGC AGCGCCGCTC GCGCTTGGCC TCGCTGGCCT CATTCCTTTT
GTGTGGGGCG CCCTGACGCT GCTGGTGCCT GCATTGCAGT CGTGGGGGAT CAGCGCGCTT
GGCCCACGCT TTGTCGGTCC CTATGTGCAG CTGTTTTACG GCTCGGTGAT CCTAAGCTTC
ATGTCCGGTG TGCTCTGGGG GTATGCCACG CGTGCCTCTG GCCGCCTGCA ATCGGCGGCC
TGCTACGCGC TTTCGGTGAT CCCGGCGCTC TGGGCCTTCT TTATGACCGG CGGCGGCCCC
GTCAGCGCGG GACTCAACCT GATCTGGGGC TTCCTCGGCC TGTTGCTCTT GGACATGATG
TTCAGCCTGT GGCGCCTGAC GCCCGCGTGG TGGGTTCGAC TGCGCGTGCT GCTCACCGCT
ATTGTGGTCC TGAGCCTCAG CATCGGCGTC TTCCTATGA
|
|---|
| Protein sequence | MFRGIPAAPL ALGLAGLIPF VWGALTLLVP ALQSWGISAL GPRFVGPYVQ LFYGSVILSF
MSGVLWGYAT RASGRLQSAA CYALSVIPAL WAFFMTGGGP VSAGLNLIWG FLGLLLLDMM
FSLWRLTPAW WVRLRVLLTA IVVLSLSIGV FL
|
|---|
| |