| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2554 |
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| Symbol | |
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| ID | 4076685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2697641 |
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| End bp | 2698471 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007878 |
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| Product | prephenate dehydratase |
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| Protein accession | YP_614548 |
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| Protein GI | 99082394 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0077] Prephenate dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00183494 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCAGA AAATCGCAAT TCAGGGCGAA CTCGGCTCCT ACAGCCACGA GGCCTGCCGC
AACAAACGGC CCGATATGGA GGTGCTGCCC TGCCGGGGAT TTGAGGATGC CATCAACGCC
GTGCGCTCCG GCGAGGCCGA GCTCGCGATG CTGCCGGTGG AAAACACCAC CTATGGCCGG
GTCGCAGATA TTCACCGCCT GCTGCCCCAT TCCGGCCTCA AGATCATCGA TGAGGCTTTT
GTGCGCGTCC ACATCAACCT CCTGGGGGTG CCCGGAGCCA CCCTTGATGA CATCAAGGAA
GCGCATTCGC ATCTGGTGCT GTTGCCACAA TGCGCAACTT TCCTGCGCCA ACACCAGATC
CAGGGCCGCG TCAGCCCTGA CAACGCGCGC GCCGCCCGCG AGGTGGCCGA GCGCGGGGAG
ATCACCCACG CTGCGCTCGC GTCGGAACTG GCCGGTGAGA TCTACGGTCT CAATGTACTG
GCCCGCCACA TTGAGGATCA GGGCAACAAC ACCACGCGGT TCCTGACCAT GGCACGCGAG
GCCGATACAA GCCGCCGCGG CGATAACGGC ATGATCACCA GTTTTGTCTT TCAGGTACGC
AACATTCCCG CCGCGCTTTA TAAGGCGATG GGCGGGTTTG CCACCAATGG CGTCAACATG
ACCAAGCTCG AGAGCTACAT GGTCAATGGC TCTTTTACGG CGACCCAGTT CTATGCCGAC
ATCGACGGCC ACCCGGAGGA TGAGAACGTC CGCCTCGCCA TGGATGAGCT GAGCTATTTC
ACAACCGATG TGGAAATCCT CGGCGTCTAT CCCGCAGATC GCAAACGCTG A
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| Protein sequence | MTQKIAIQGE LGSYSHEACR NKRPDMEVLP CRGFEDAINA VRSGEAELAM LPVENTTYGR
VADIHRLLPH SGLKIIDEAF VRVHINLLGV PGATLDDIKE AHSHLVLLPQ CATFLRQHQI
QGRVSPDNAR AAREVAERGE ITHAALASEL AGEIYGLNVL ARHIEDQGNN TTRFLTMARE
ADTSRRGDNG MITSFVFQVR NIPAALYKAM GGFATNGVNM TKLESYMVNG SFTATQFYAD
IDGHPEDENV RLAMDELSYF TTDVEILGVY PADRKR
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