| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2551 |
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| Symbol | |
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| ID | 4076682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2693730 |
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| End bp | 2694818 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638007875 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_614545 |
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| Protein GI | 99082391 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.280481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0903664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAACT ATATTCTGCG GCGTCTTCTG CTGGTGATCC CGACACTGAT CGGGATCATG
GTAGTGAATT TCGCGCTCGT GCAGTTTGTC CCCGGTGGAC CGGTGGAGCA GATGATTGCC
CGCCTTGAGG GCGGTGGCGA TGTCTTTGGC GGCTTTGCTG GGGCGGCGAA TGATGCCGGG
GCAGAGACCG TTGGTCAGGC CGAAAGCCAA TACGCCGGGG CGCGGGGGCT GCCGCCTGAA
TTCATCGAGG AACTGGAGCG CGAGTTCGGC TTTGACAAAC CTCCCCTCGA GCGGTTCCTC
AACATGATGT GGAACTACGT CCGGCTTGAT TTCGGCGAGA GCTATTTTCG CAATATCGGC
GTGATTGATC TGGTGCTCGA AAAGATGCCA GTGTCGATCT CGCTGGGACT GTGGTCCACC
CTCATTGCCT ATCTGATCTC GATCCCGCTT GGTGTGAAAA AGGCGCTGCG CGATGGCAGC
AGCTTTGACA GTTGGACCAG TGGCGTGATC ATCGCGGCCT ATGCAATCCC GGGCTTCTTG
TTTGCGATCC TCCTTCTTGT GCTTCTGGCC GGGGGGTCAT ACTGGCAGAT TTTCCCTCTA
AGGGGCCTGA CATCCGAGAA TTGGGAAGAG CTGAGCCTTC TGGGCAAGAT CGGCGACTAT
TTCTGGCACA TTACCTTGCC GGTGGTGGCC TCGACCATTT CGGCCTTTGC GACGCTCACC
TTGCTGACCA AGAACTCCTT TTTGGACGAG ATCAAGAAAC AGTATGTGAT GACTGCCCGT
GCCAAAGGGT TGACGGAAAA CCGGGTGCTC TACGGGCATG TGTTTCGCAA TGCGATGCTG
ATCGTGATTG CTGGTTTTCC GGGGGTGTTC ATCTCGATCT TTTTCACCGG CAGCCTGATC
ATCGAGACGA TCTTCTCGCT CGACGGTCTC GGGCGGCTCG GGTTTGAGGC TGCGGTCGCG
CGTGACTACC CGATTGTATT TGGGACACTT TTCATCTTTG GTCTGATGGG CCTGGTGGTT
GGGATCTTGT CAGACATTAT GTATGTGCTG GTGGATCCAC GCATCGACTT TGAAAAGCGG
GAGGGATGA
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| Protein sequence | MLNYILRRLL LVIPTLIGIM VVNFALVQFV PGGPVEQMIA RLEGGGDVFG GFAGAANDAG
AETVGQAESQ YAGARGLPPE FIEELEREFG FDKPPLERFL NMMWNYVRLD FGESYFRNIG
VIDLVLEKMP VSISLGLWST LIAYLISIPL GVKKALRDGS SFDSWTSGVI IAAYAIPGFL
FAILLLVLLA GGSYWQIFPL RGLTSENWEE LSLLGKIGDY FWHITLPVVA STISAFATLT
LLTKNSFLDE IKKQYVMTAR AKGLTENRVL YGHVFRNAML IVIAGFPGVF ISIFFTGSLI
IETIFSLDGL GRLGFEAAVA RDYPIVFGTL FIFGLMGLVV GILSDIMYVL VDPRIDFEKR
EG
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