| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2550 |
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| Symbol | |
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| ID | 4076681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2692619 |
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| End bp | 2693725 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638007874 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_614544 |
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| Protein GI | 99082390 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.247928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.144081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGT CTCCTCTCAA TCAGCGGCGG TGGAACAACT TCAAACGCAA CCGTCGCGCC
CTGTGGTCGC TCAGGATCTT TTTGGTGCTG TTTGGCCTGT CGCTGTTTGC GGATGTTCTC
GCGAACGACA AACCGATCCT CGTGAATTAT CGCGGCGACT ATTACACGCC TGTTTGGAAC
TTCTATCCCG AGACCACCTT TGGCGGTGAT TTCCAGACCG AAGCCGTCTA CCGCGATCCC
GAAGTGAAAT GTTTGATTGC CTCTGGAGGC AGTCTCGATT GTTTTGACGA TCCCGAAGGG
ATCATGGCTG CGATTGATTC AGGCACATAT GCAGCCGAGG ATTTTGTCGA AGGCTGGTCG
CTCTGGCCGC CGATCCCTTA CCGGTTTGAC ACGCCGGTTG ATCGCGCGGG CGCAGCCCCG
CTGCCGCCAA ACGGGCAGAA CTGGCTCGGG ACCGATGACA CCAAACGCGA TGTGCTTGCC
CGCGTTATCT ATGGTTTCAG ACTCTCCATC CTTTTCACCC TGATCGTCAC CCTTGCGGCG
AGCCTGATCG GGATTGTTGC GGGCGCGGTG CAGGGGTTCT TTGGCGGATG GGTTGATCTG
ATCTTCCAAC GTGTCATCGA GATCTGGTCA GCGACACCGT CGCTCTATGT CATCATCATC
ATGTTTGCGA TCCTCGGGCG AAGTTTCTGG CTCCTTGTCT TCCTGATGAT CCTGTTCAGT
TGGACCGCTC TTGTGGGGGT GGTGCGCGCG GAGTTCCTGC GCGCCCGCAA CCTCGAGTAT
GTCCGCGCGG CCAAGGCGCT GGGGGTCGGC AATGTAACGA TCATGTTCCG CCACATGCTG
CCCAATGCGA TGGTGGCGAC GCTCACCATG CTGCCGTTCA TCGTGACAGG GACCATCGGC
ACATTGGCAA GCCTCGACTT CCTTGGTTTT GGGCTGCCGT CGTCGGCGCC CTCCTTGGGG
GAGATGACCT TGCAGGCCAA ACAGAACCTG CAAGCGCCCT GGCTTGCCTT TACCGCCTTC
TTCACCTTTG CAATCATGCT CTCGCTTCTG GTCTTCATTT TTGAAGGCGT GCGGGACGCG
TTTGACCCGA GAAAGACCTT TTCATGA
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| Protein sequence | MALSPLNQRR WNNFKRNRRA LWSLRIFLVL FGLSLFADVL ANDKPILVNY RGDYYTPVWN
FYPETTFGGD FQTEAVYRDP EVKCLIASGG SLDCFDDPEG IMAAIDSGTY AAEDFVEGWS
LWPPIPYRFD TPVDRAGAAP LPPNGQNWLG TDDTKRDVLA RVIYGFRLSI LFTLIVTLAA
SLIGIVAGAV QGFFGGWVDL IFQRVIEIWS ATPSLYVIII MFAILGRSFW LLVFLMILFS
WTALVGVVRA EFLRARNLEY VRAAKALGVG NVTIMFRHML PNAMVATLTM LPFIVTGTIG
TLASLDFLGF GLPSSAPSLG EMTLQAKQNL QAPWLAFTAF FTFAIMLSLL VFIFEGVRDA
FDPRKTFS
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