| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2549 |
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| Symbol | |
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| ID | 4076680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2690971 |
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| End bp | 2692563 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007873 |
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| Product | ABC transporter related |
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| Protein accession | YP_614543 |
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| Protein GI | 99082389 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.165477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAG CGCCAATTCT GCAGGTCAAG GACCTTCGGG TCGCCTTTCG TCAGGACGGT
CAGCGGGTTG AGGCCGTCAA AGGGGTGTCC TTTGCCCTGT CTCGTGGCGA GACGGTGGCT
TTGGTGGGCG AGTCGGGCTC CGGCAAATCG GTCTCGGCGC TTTCGACGGT GCAGCTCCTT
GGTGATAGCG CCGAGGTCTC CGGCTCGGTG AACTATGACG GACAGGAAAT GATCGGCGCC
GATGAACGTA CCCTGCGACG GGTGCGCGGC AATGACATCT CCTTCATTTT CCAGGAGCCG
ATGACCTCTC TGAACCCGCT GCATACGATC GAAAAACAGT TGGGCGAGGC GCTTGCGCTA
CATCAGGGAG TGATGGGAGA GGACGCCCGC GCGCGTGTGC TGGACCTGTT GAATAAGGTT
GGTATCCGGG ACGCGGAAAC CCGACTGGGG GCTTATCCGC ACCAGCTTTC TGGCGGTCAA
CGTCAGCGTG TAATGATCGC AATGGCGCTC GCCAACAAAC CCGACGTTCT GATCGCGGAC
GAGCCCACAA CGGCGCTCGA TGTGACCATT CAGGCGCAGA TCCTCGATCT CCTTGCGGAT
CTGAAACAGA GCGAGGGGAT GGGGCTTTTG TTCATCACCC ATGACCTCTC GATTGTGCGC
CGTATTGCGG ATCGGGTCTG CGTGATGAAA TCCGGTGAAA TTGTCGAGGA AGGTCCAACG
GCTGAGCTGT TTGCAAACCC ACAGCACCCC TACACCCAGA AACTCCTGGC GGCAGAACCC
TCCGGTCGAC CCGCGCCGAT CCCGGAAGGG GCAACCGAAT TCGTCAGTGC CAAGGATCTC
AAGGTCTGGT TTCCCATCCA GCGGGGGCTA CTGAAGCGCA TGGTTGGCCA TGTCAAGGCG
GTCAATCCCA TGTCGCTCTC GGTGCGCGCC GGGGAAACTT TGGGAATTGT AGGCGAATCC
GGCTCGGGCA AAACCACGAT GGCACTTGCG ATCATGCGCC TTATCGCCTC CGAAGGCGAG
GTGCGCTTTC AGGATCAGGA CCTGCGCCAA TGGTCCACGC GGGACCTGCG CCGGTTGCGC
AAGGACATGC AGATCGTGTT TCAGGATCCG TTTGGCTCGC TGTCTCCGCG TATGACATGC
CAGCAGATCA TTGCCGAAGG TCTGGCAATT CATGAGGTTG ACCAACATCG TAAGCCGCGT
GATCTTGTGG CTGATGTAAT GCAGGAAGTG GGTCTCGACC CTGCCACCAT GGACCGCTAT
CCACATGAAT TCTCAGGTGG GCAGCGTCAG CGCATTGCCA TCGCCCGTGC AATGGTTCTG
CGCCCCAAGC TGGTGGTTCT GGACGAGCCG ACCTCGGCCC TTGATATGAC GGTCCAGGTG
CAGATCGTGA ACCTGCTGCG CGATCTTCAG GCCCGCTACG GGCTTGCCTA TCTCTTCATC
AGCCATGACC TCAATGTGGT GCGCGCCATG TCGCATGACA TCCTGGTGAT GAAAGCCGGA
GACGTGATCG AGCAAGGCCC CGCCGAGGAG GTATTTGCCA ATCCCAAAGA AGAATACACA
CGGCATCTGC TCTCTGCCGT GACGGGTGCC TAG
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| Protein sequence | MTQAPILQVK DLRVAFRQDG QRVEAVKGVS FALSRGETVA LVGESGSGKS VSALSTVQLL
GDSAEVSGSV NYDGQEMIGA DERTLRRVRG NDISFIFQEP MTSLNPLHTI EKQLGEALAL
HQGVMGEDAR ARVLDLLNKV GIRDAETRLG AYPHQLSGGQ RQRVMIAMAL ANKPDVLIAD
EPTTALDVTI QAQILDLLAD LKQSEGMGLL FITHDLSIVR RIADRVCVMK SGEIVEEGPT
AELFANPQHP YTQKLLAAEP SGRPAPIPEG ATEFVSAKDL KVWFPIQRGL LKRMVGHVKA
VNPMSLSVRA GETLGIVGES GSGKTTMALA IMRLIASEGE VRFQDQDLRQ WSTRDLRRLR
KDMQIVFQDP FGSLSPRMTC QQIIAEGLAI HEVDQHRKPR DLVADVMQEV GLDPATMDRY
PHEFSGGQRQ RIAIARAMVL RPKLVVLDEP TSALDMTVQV QIVNLLRDLQ ARYGLAYLFI
SHDLNVVRAM SHDILVMKAG DVIEQGPAEE VFANPKEEYT RHLLSAVTGA
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