| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2545 |
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| Symbol | |
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| ID | 4076676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2685879 |
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| End bp | 2687483 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638007869 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_614539 |
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| Protein GI | 99082385 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.199988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.933965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAATT ATCTCAAGCT GATAGTGCTT GGCGTATTGA CGGTCTTCTT CATGATCGCC
GCCGGCTACG CCAGGGATCT GGCGTATCAG GTACATGCGG TGATCTTGAT GCTCGTCGCA
GGTGGCCTGT TCTTGTGGAC ACTGCGCGAG ACCGACGAGC CGGTTCCGGC TCCCGTCACC
GGGGAATATC TCGATGGCGT GGTGCGCGCA GGTGTCATTG CAACCGCATT CTGGGGTGTC
GCGGGGTTCC TTGTGGGGAC CTTCATTGCG TTCCAGCTGG CTTTTCCGGT TCTGAATTTT
GATTGGTCCG AAGGGTTTGC GAATTTTGGC CGCCTGCGTC CGCTGCACAC ATCTGCAGTG
ATTTTTGCGT TTGGCGGTAA CGCGTTGATC GCGACGTCCT TTTACATCGT GCAGCGCACC
TCGGCGGCAC GACTCTGGGG CGGCAACCTC GCGTGGTTTG TCTTCTGGGG CTATCAGCTG
TTTATCGTGC TTGCGGCAAC CGGCTATCTC TTGGGCGGAA CGCAGTCCAA GGAATACGCT
GAGCCCGAGT GGTACATCGA CCTGTGGCTG ACCGTTGTCT GGGTGGCCTA TCTGGCGGTG
TTCCTCGGTA CCATCATTCG CCGCAAAGAG CGCCACATCT ATGTGGCCAA CTGGTTTTTC
CTCGCCTTCA TCGTGACCGT CGCGATGCTG CACCTCGTCA ACAACCTGAC CATTCCTGTT
TCGATCTGGG GCTCCAAGTC CGTGATTGTC TGGCCTGGTG TACAGGATGC CATGGTGCAG
TGGTGGTATG GCCACAACGC GGTGGGCTTC TTCCTGACCG CAGGCTTCCT CGGCATGATG
TATTATTTCA TTCCCAAGCA GGCAGATCGT CCGGTTTACA GCTATAAACT GTCGATCATC
CACTTTTGGG CGCTGATCTT CATCTACATC TGGGCCGGCC CACACCACCT GCATTATACC
GCGCTGCCGG ACTGGGCCTC GACGCTGGGC ATGGTGTTCT CGATCGTGCT GTGGATGCCC
TCCTGGGGTG GCATGATCAA CGGTCTGATG ACGCTCTCGG GCGCTTGGGA CAAGCTGCGC
ACCGATCCGG TCCTGCGGAT GCTGGTGATC TCGGTTGGCT TCTACGGCAT GTCCACATTT
GAGGGTCCGA TGATGTCGAT CCGTGCGGTG AACTCGCTGA GCCACTACAC CGACTGGACC
ATTGGTCACG TGCACTCTGG TGCGCTGGGC TGGAATGGTA TGATCACCTT CGGTGCGCTC
TACTACCTGA CCCCGGTTCT GTGGAAGCGT GAGCGGCTCT ACTCCCTGAG CCTGGTCAGC
TGGCACTTCT GGCTCGCGAC CATCGGCATC GTTCTCTATG CGGCGTCCAT GTGGGTGACC
GGTATCATGG AAGGCCTGAT GTGGCGTGAA GTGGATGCGA ACGGCTTCCT CGTGTGGTCC
TTTGCCGACA CCGTTGCTGC GAAGCTTCCG ATGTATGTGA TGCGTGGTTT GGGCGGGGTT
CTGTTCCTCA CCGGGTCGCT GGTCATGTGC TATAACCTCT GGATGACCGT TCGTCGGGCG
CCGGCCAAAG AGGCCAGCCT GTCCGTCGCG GTCCCGGCTG AATAA
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| Protein sequence | MSNYLKLIVL GVLTVFFMIA AGYARDLAYQ VHAVILMLVA GGLFLWTLRE TDEPVPAPVT
GEYLDGVVRA GVIATAFWGV AGFLVGTFIA FQLAFPVLNF DWSEGFANFG RLRPLHTSAV
IFAFGGNALI ATSFYIVQRT SAARLWGGNL AWFVFWGYQL FIVLAATGYL LGGTQSKEYA
EPEWYIDLWL TVVWVAYLAV FLGTIIRRKE RHIYVANWFF LAFIVTVAML HLVNNLTIPV
SIWGSKSVIV WPGVQDAMVQ WWYGHNAVGF FLTAGFLGMM YYFIPKQADR PVYSYKLSII
HFWALIFIYI WAGPHHLHYT ALPDWASTLG MVFSIVLWMP SWGGMINGLM TLSGAWDKLR
TDPVLRMLVI SVGFYGMSTF EGPMMSIRAV NSLSHYTDWT IGHVHSGALG WNGMITFGAL
YYLTPVLWKR ERLYSLSLVS WHFWLATIGI VLYAASMWVT GIMEGLMWRE VDANGFLVWS
FADTVAAKLP MYVMRGLGGV LFLTGSLVMC YNLWMTVRRA PAKEASLSVA VPAE
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