| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2538 |
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| Symbol | |
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| ID | 4076540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2678162 |
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| End bp | 2680345 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007862 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_614532 |
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| Protein GI | 99082378 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCC AGATGCACCA CCAAACGGCG GTTTGTCCGG GCTGCGCGGC CGCTCCGACA
GAAGCTATTG CGCAGGCCCC GACCGAGGCG CGTCTCGCGA TCTCGTTGCC AACAATCCAT
TGTCAGGCCT GTATTTCCGC CGTTGAGCGC GGTCTGTCGC AAGTGCCGGG TGTACGGTCT
GCGCGGGTGA ACCTCACGTT GAAGCGCGCC TTGGTGGAGG CCGAACCAGA AATGCGCGCC
GCCGACTTGG TCCCGATCTG CGCGTCGCTT GGTTACGAGG CGCATGAGTT GGATCTGGCA
GCCCTGGCCG CTACGGAGAC GGATCGGGCG GGGCGTGAAC TGTTGTTGCG TCTGGCAGTG
GCGGGGTTTG CGTCCATGAA CGTGATGCTG CTGTCGATCT CGGTCTGGTC CGGGGCTTCC
GATGCCACCC GTGACATGTT TCACTGGATT TCGGCGGCGA TCACATTCCC GGCCATCGTC
TATTCTGGGC ATCCCTTCTT TAAGAACGCA TGGCAGGCGT TGCGGGCGCG GCGGCTCAAT
ATGGATGTGC CGATTGTTCT TGCGCTGCTG TTGGCGCTGC TGACCTCCCT TTGGGAGACG
ACACTGTCCG GGGAGCATGC CTATTTTGAT GCCGCCCTGA CGCTGACGTT CTTCTTGCTG
GCGGGGCGCT ATCTCGATCA TCGGACACGC GCGGCGGCCC GCTCTGCCGC CGAGGAGCTT
GCAGCGCTTG AGGTGCCGCG TGCCTGGCGA CTGGACAAAC AGGGACAAGA GGTCGAGGTC
TCGGTCGCCG ATCTGACCAT CGGGGATTTG ATCCGCGTGC GACCCGGGGG GCGCATGCCC
GTAGACGGAG AGATCACCGA GGGGCGCTCG GAACTTGATC GTTCTTTGCT CACCGGGGAA
ACCCTTCCGG TGCTGGCAGA GCCCGGGGGC CTTGTCTCTG CAGGGGAAGT GAACCTCACG
GGGCCGCTGA CGATCCGCGC CACAGCTGTT GGCGCAGAGA CGTCGCTGCA CCGAATGGCG
GATCTGGTTG CGATCGCCGA GTCGGGCCGG TCGCGCTACA CCTCTCTGGC AGATAGCGCT
GCAAAGCTCT ATGCGCCGGG GGTACATATC CTCTCGGCTC TTGCGTTTGT TGGGTGGTAT
CTTTATACCT GCGATCTGCG CACGGCCCTC AATATCGCCG CAGCTGTTCT GATTATCACC
TGCCCATGTG CGCTTGGTCT TGCGGTTCCT GCAGTGACCA CTGCGGCATC GGGGCGGCTG
TTCCGGGCCG GGCTTCTTGT CAAACACGCC ACCGCGCTTG AACGGCTGGC CGAGGTTGAT
ACGGTAGTTT TTGATAAGAC CGGAACCTTG ACGGAGGGCG CGCCGGAAGT TGTCAACCTC
GATACACTCA GCCCCAAAGA ACGCTCTGTT GCGCTTGCCT TGGCGTCTGG CTCAAGTCAC
CCGCTGGCCA TTGCGCTGTC GCGGGCAGCG AGAGATGCAG GGGCGGAGCC AGCTGTGCTT
GAAGATCTGC GCGAAGTGCC CGGCTATGGC ACCGAGGCGC GTCTGAACGG CCAGCCGGTT
CGGCTTGGGC GTGCAGCATG GGTCGGTGCT CGAGGGACGC AAGAGCAAAC TGCGACCTGG
CTGGATCTCG GAGAGGGGGC GCCTGTCGCA ATTTGTTTCA AAGATGCCCT TCGCGCCGGT
GCCGAAGAGG TCGTGCGCGC GCTACAGGGG GCGGGCAAGG ATGTTCTGCT GATATCTGGT
GACACCACAG CCGCAGTGGA GGATCTGGCG AAGCGCCTGG GCATTCAAAG CTGGGTGGCT
GAGGCCCTGC CTGAGGACAA GGCCGCTCGC ATTGCGGAGC TGACCCAGAC AGGGCGCAAG
GTGCTGATGG TGGGTGATGG GCTCAATGAT ACCGCTGCAT TGGCAGGTGC GCATGTGTCG
ATCTCTCCGG CTTCGGCACT GGATGCAGCA CGGGTTGCCT CAGACATTGT TTTGCTCGGC
AAAGATCTAG CGCCCATCGC TGAAGCCTGC GGCGTGGCAG AGCGTGCGAC CAGACGCATC
CGGGAAAACT TCCAGATCGC AACACTCTAT AATGTGATTG CGGTGCCCCT TGCGATCGCG
GGCCTGGCCA CCCCCTTGAT CGCGGCGCTG GCGATGTCCA CGTCATCCAT AACTGTTTCA
CTCAACGCCT TGCGTCTGCG TTAG
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| Protein sequence | MTAQMHHQTA VCPGCAAAPT EAIAQAPTEA RLAISLPTIH CQACISAVER GLSQVPGVRS
ARVNLTLKRA LVEAEPEMRA ADLVPICASL GYEAHELDLA ALAATETDRA GRELLLRLAV
AGFASMNVML LSISVWSGAS DATRDMFHWI SAAITFPAIV YSGHPFFKNA WQALRARRLN
MDVPIVLALL LALLTSLWET TLSGEHAYFD AALTLTFFLL AGRYLDHRTR AAARSAAEEL
AALEVPRAWR LDKQGQEVEV SVADLTIGDL IRVRPGGRMP VDGEITEGRS ELDRSLLTGE
TLPVLAEPGG LVSAGEVNLT GPLTIRATAV GAETSLHRMA DLVAIAESGR SRYTSLADSA
AKLYAPGVHI LSALAFVGWY LYTCDLRTAL NIAAAVLIIT CPCALGLAVP AVTTAASGRL
FRAGLLVKHA TALERLAEVD TVVFDKTGTL TEGAPEVVNL DTLSPKERSV ALALASGSSH
PLAIALSRAA RDAGAEPAVL EDLREVPGYG TEARLNGQPV RLGRAAWVGA RGTQEQTATW
LDLGEGAPVA ICFKDALRAG AEEVVRALQG AGKDVLLISG DTTAAVEDLA KRLGIQSWVA
EALPEDKAAR IAELTQTGRK VLMVGDGLND TAALAGAHVS ISPASALDAA RVASDIVLLG
KDLAPIAEAC GVAERATRRI RENFQIATLY NVIAVPLAIA GLATPLIAAL AMSTSSITVS
LNALRLR
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