Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2536 |
Symbol | |
ID | 4076538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2676295 |
End bp | 2677785 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638007860 |
Product | Serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_614530 |
Protein GI | 99082376 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCATGG ATGCGCGTAC CGGCGAAGTG CTGCATTCGC GCAATGCGGA TACTCGGCTG CACCCCGCCT CGCTGACCAA GATGATGACC CTATACATCG CCTTTGAGGC GGTGCGGAAC GGGGAAATCA CCCTCGACAC CCAGATCACG GTTTCGCGCA ATGCCGAGGC AGAACCTCCT TCTGAGTTGG GCCTGCGCCG CGGGCAAAAA ATCGCACTAC GGTATCTGAT CCGGGCCGCA GCGGTAAAAT CCGCCAATGA TGCGGCCACG GCCATTGGTG AGGCGATCTC CGGGTCTGAG GCGGCCTTTG CGCGGCGAAT GAATCGCACC GCCAAGGCAC TGGGAATGAC CCGCACGACC TTCAAGAACG CGCATGGGCT GACTGCCAAT GGTCACATGT CGACGGCACG CGACATGACA ATCCTCGGAC GTCATATGCT TTATGACTAC CCTGAGTATT ATAATCTCTT TTCGCGCACC TCGACCAACG CGGGCACCAA GGTTGTCTAC AACACCAACC GCCGCTTTCT CGCGGCCTAC CGCGGTGCGG ATGGCATCAA GACCGGCTAT ACGCGCGCAG CCGGGTTCAA CCTCGTCTCC TCTGCAAAAC GGGGCGATGA GCGCATCATT GCAACCGTAT TTGGCGGGAA ATCCACCGCG GCACGCAACG CCAAGATCGC AGAACTCCTG GACCTCGGCT TCCGGCGCGC TCCGGCCTAT GCCAAACTGC AAAAGCCCCC TATGCCGCCC TACCTCGGCA ACAGCGGTGT GCGCCTGGCA GAGGATGACA CGCATGGCAT GGCCGGAAAG ACGATCCGCG TCAGCGGGGT GATTTCAGAG ACCCTGCGCC CACGGCCCCG TCCGCTGCCA GAGCCTGCCC CGGAAACGCT ACTTGCAGAG GCTGAAACAG AGGTCGAGAC CGGTACTGTT GCCGCACCTG AAGAGGTGCA GCTCGCCGCG CTGGATAGCG ATGCCCTGAA ATCCGGCATC AACGACGCTC TTTTGGAAGT CACCGAAGTC TCCGATGTCT CGGCAATCCA ACCTCAGGCG CGGCCCGAGG CTCTTCAGGC AGAGGTGGAA GGTGAGCAAG CCCTGCAGGC GGAAATCCGA ACAGCGGTCG CGCGCGCCGT TGAGGCCCCG ACGCAACCGC GCTACACCGG GCCACGTCCA CAGGCGCGCC CAGCAAAATT CAACACCGAA GTTGCTTCGC TCGAGGAACC AGTCGTGGTG ACACGCCTGT CGACCTCTGG CGGCCGCTAC TGGGGGATCA ATGTCGGACG CTACACCAAC CGTTTTCAGG CCGAAAAAGT CTTGTTGCGC ACGGCTTTGG CCGAAATGGA GACGCTCGAA GGCTCTCTGC GCAAGGTGGT GCAGAGTCCG CGCGGATTTG ACGCCAATTT CCTTGGGATG ACCAAGGAAA GCGCCGAGCT CGCATGCAAG CGCCTCAACT CTCGCAATGT CACCTGCGAG ACACTTGGCC CCTCCTCCTA A
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Protein sequence | MVMDARTGEV LHSRNADTRL HPASLTKMMT LYIAFEAVRN GEITLDTQIT VSRNAEAEPP SELGLRRGQK IALRYLIRAA AVKSANDAAT AIGEAISGSE AAFARRMNRT AKALGMTRTT FKNAHGLTAN GHMSTARDMT ILGRHMLYDY PEYYNLFSRT STNAGTKVVY NTNRRFLAAY RGADGIKTGY TRAAGFNLVS SAKRGDERII ATVFGGKSTA ARNAKIAELL DLGFRRAPAY AKLQKPPMPP YLGNSGVRLA EDDTHGMAGK TIRVSGVISE TLRPRPRPLP EPAPETLLAE AETEVETGTV AAPEEVQLAA LDSDALKSGI NDALLEVTEV SDVSAIQPQA RPEALQAEVE GEQALQAEIR TAVARAVEAP TQPRYTGPRP QARPAKFNTE VASLEEPVVV TRLSTSGGRY WGINVGRYTN RFQAEKVLLR TALAEMETLE GSLRKVVQSP RGFDANFLGM TKESAELACK RLNSRNVTCE TLGPSS
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