| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2527 |
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| Symbol | |
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| ID | 4076529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2667184 |
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| End bp | 2668305 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007851 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_614521 |
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| Protein GI | 99082367 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTCGAAG GCATACGCAT CATTGAAATC GAAGCGCTCG GTCCCGCCCC ATTTGCGGCC
ATGATGCTTT CGGATCTCGG CGCCGAGGTC ATCTGCATTC ACCGCAAAGG CGCTGCGGCC
ACATCCATCA TGCCAGAGCG CTCTATCCTG GATCGGGGCA AGAAATCCAT TGCTCTGGAC
CTCAAGGACC CGAGCGATCT GAAGATCGCA CAGGATCTCA TTGCAACCGC GGACGGCTTA
ATTGAGGGGT TCAGACCGGG CGTGATGGAA CGTCTCGGGC TCGGCCCCCA AGCCATGCAG
AGTAATAATC CACGCCTTGT TTACGGCCGG CTAACGGGGT GGGGGCAAGA CAGCCCCAGA
GCCAACGAGG CTGGACACGA CCTGAATTAC ATCGCGCTCT CCGGCGCGCT TTGGCCCGCG
TCGAATGCCG GTAACGCCCC TATGCCGCCG GCCACCCTTG TGGGTGATAT CGGGGGCGGC
GCGCTCTACC TCGTCGCAGG GCTTCTGGCC GGCCTCTTGC GCGCCGCACA AACCGGCATG
GGCACCGTTG TCGACGCGGC GATCTACGAT GGCTCCGCAC ATATGATGAC TCTTTTGATG
GCCCTGCGCC AAGCTGGCAG CTTTGGCGAA ACACGCGGCG AGAACCTGCT CGACGGTCCC
CATTGGAGCA GAACCTATCG TTGCAGATGC GGAGGCTATA TCGCGGTCCA ATGTCTTGAG
CCGAAATTCT ACGAAATTTT TCTGGAGAGA CTAAACCTCG CGCAGGATAC CGATTTTCAG
CAGCAGTTCG ACAAGGCTTC GTGGCCAGCT CTTACCTCGC GGCTCGCTCG CCTTTTTGCC
ACGCAAGACC GCGAGCACTG GTCAGCCCTG TTTGCCACCA GTGATGCCTG CGTCACCAAG
GTTCTGTCCC CGTCCGAGGC TGCCAAGGAC CCGATGAACG ACAGACAGAC CTGGCACACC
ACAGGGGGCA TACTGCAAGC GGCCCCCGCA CCTCGCTTTG ACGGGCAGAC ACGAGCGCCC
AAAAAGCCGC CAAATCGTGA CGAGCACCGA GCGGAGATAC TTGCGATGCT GCGCGCGGAC
GTCTCCCCCT CTTCCAACGA GAAATACCCC GGGGGTGTTT GA
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| Protein sequence | MLEGIRIIEI EALGPAPFAA MMLSDLGAEV ICIHRKGAAA TSIMPERSIL DRGKKSIALD
LKDPSDLKIA QDLIATADGL IEGFRPGVME RLGLGPQAMQ SNNPRLVYGR LTGWGQDSPR
ANEAGHDLNY IALSGALWPA SNAGNAPMPP ATLVGDIGGG ALYLVAGLLA GLLRAAQTGM
GTVVDAAIYD GSAHMMTLLM ALRQAGSFGE TRGENLLDGP HWSRTYRCRC GGYIAVQCLE
PKFYEIFLER LNLAQDTDFQ QQFDKASWPA LTSRLARLFA TQDREHWSAL FATSDACVTK
VLSPSEAAKD PMNDRQTWHT TGGILQAAPA PRFDGQTRAP KKPPNRDEHR AEILAMLRAD
VSPSSNEKYP GGV
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