| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2521 |
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| Symbol | |
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| ID | 4076523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2661587 |
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| End bp | 2662363 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007845 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_614515 |
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| Protein GI | 99082361 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCAT TGGTAACCGG AGCGGGTAAG CGTTTGGGGC GGGCAATGGC CTTGGCGCTT
GCAGAGGACG GCTATGACGT TGCCGTCCAC TATGCCTCAT CGGAGCAAGA CGCCAACGAT
GTCGTGGCGC AAATCGAGGC ACGAGGCCAG CGGGCCGTCG CGTTGCGAGC GGACCTGTTG
CGAGATACAG AAACCGAGGC GTTGCTCCCG CAGGCAGCTG AAGCGCTCGG TGGGGACATC
ACCTGTCTCA TCAACAACGC GTCAATTTTT GAACCTGATG ATCTCGCCTC CGTGACCCGC
GACAGTTGGG ATCGTCATAT GCAGAGCAAT TTGCGAGCGC CTGTGCTGTT GCTTCAGGCG
TTGGCCGCGC AGTCTCTGCC GGATCTCTCG GATGAGGCCG GCGAGCCCCG CGCTGCGGCT
GTGGCGATCA ACATGGTTGA CCAGCGGGTC AACAAGCTCA CCCCGGACTT CCTGAGCTAC
ACACTGGCGA AATCCGCGCT TTGGACCCTG ACGCAGACGG CAGCGCAGGC CTTGGCGCCA
CGGATCAGGG TGAATGCAAT TGGACCGGGA CCGACGCTTC AGGGGCCGCG CCAGAGTGTT
GCCGACTTTG CTGCGCAACG TCGCGCCACC CCGCTGCAGC GCGGCGCGGG AGAGCAGGAC
ATCACCTCGG CGCTGCGCTA TCTGGTCGGC GCGCCGGCCA TTACCGGACA GCTCATTTGC
GTCGATGGCG GGCAGCATTT GGCCTGGCAG ACGCCAGATG CGTTGCTACC GGAATAA
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| Protein sequence | MRALVTGAGK RLGRAMALAL AEDGYDVAVH YASSEQDAND VVAQIEARGQ RAVALRADLL
RDTETEALLP QAAEALGGDI TCLINNASIF EPDDLASVTR DSWDRHMQSN LRAPVLLLQA
LAAQSLPDLS DEAGEPRAAA VAINMVDQRV NKLTPDFLSY TLAKSALWTL TQTAAQALAP
RIRVNAIGPG PTLQGPRQSV ADFAAQRRAT PLQRGAGEQD ITSALRYLVG APAITGQLIC
VDGGQHLAWQ TPDALLPE
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