| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2513 |
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| Symbol | rplT |
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| ID | 4076515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2654320 |
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| End bp | 2654685 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007837 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_614507 |
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| Protein GI | 99082353 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCGCG TTAAAGGTGG TACCGTCACT CACGCCCGTC ATAAGAAGGT CATCAAGGCA
GCCAAAGGTT ACTACGGCCG TCGCAAGAAC ACCTTCAAGG TTGCCCGTCA GGCCGTCGAT
AAGGCCAACC AGTATGCAAC CCGTGACCGG AAGAACCGCA AGCGTAATTT CCGCGCCCTG
TGGATCCAGC GTATCAACGC TGCCGTCCGC AGCCACGACG AGGCTCTGAC CTACTCCCGC
TTCATCAACG GCCTGAACCT GGCCGGTATC GAAGTGGACC GTAAGGTTCT GGCCGACCTC
GCCGTACACG AGCCCGAAGC TTTCGGTGCG ATCGTGCGTC AGGCACAGGA CGCGCTGGCT
GCCTGA
|
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| Protein sequence | MSRVKGGTVT HARHKKVIKA AKGYYGRRKN TFKVARQAVD KANQYATRDR KNRKRNFRAL
WIQRINAAVR SHDEALTYSR FINGLNLAGI EVDRKVLADL AVHEPEAFGA IVRQAQDALA
A
|
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