| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2511 |
|---|
| Symbol | pheS |
|---|
| ID | 4076513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2651928 |
|---|
| End bp | 2653001 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638007835 |
|---|
| Product | phenylalanyl-tRNA synthetase subunit alpha |
|---|
| Protein accession | YP_614505 |
|---|
| Protein GI | 99082351 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0016] Phenylalanyl-tRNA synthetase alpha subunit |
|---|
| TIGRFAM ID | [TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGATC TTAAAGCAAA ATACCTCGGC CAGATCGCCG AAGCCACGGA TGAAAACGCG
CTGGAGGCCG TGCGCCTCGC GGCTGTGGGC AAGAAGGGCG AAGTCGCCCT CAAAATGCGT
GAATTGGGCA AGATGACACC GGAAGAGCGC CAGGTGGCCG GCCCGGCGCT GAATGCGCTC
AAGGATGAGA TCAACGCGGC GCTGGCGGCC AAGAAGGCAG CGCTTGGCGA TGCGGCCCTG
GATGAGCGTC TGCGCTCGGA GTGGCTCGAT GTGACGCTGC CAACGCGTCC GCGCCGCCAA
GGGTCGATCC ACCCGATTTC TCAGGCGTCC GAGGAGCTGA CTGCGATCTT TGCGGAAATG
GGGTTCTCCG CTCAGGAAGG CCCGCGGGTT GATACCGACT GGTACAACTT TGATGCGCTG
AATATCCCCG GCCATCACCC GGCCCGTGCC GAGATGGACA CGTTCTACAT GCACCGCGCC
GAGGGCGATG ATCGCCCGCC GCATGTACTG CGCACGCACA CAAGCCCCGT TCAGATCCGC
TCGATGGAGA AACTGGGCGC GCCCTTGCGC ATCATATGTC CCGGTGGCGT CTACCGCGCC
GACTATGATC AGACCCACAC CCCGATGTTC CATCAGGTCG AAGGGCTGGC GCTGGACGAA
AACATCTCCA TGGCGAACCT CAAATGGGTT CTGGAGGAGT TCGTGAAGAG CTTCTTTGAA
GTGGACGAGG TTGAGCTGCG TTTCCGCGCG TCGCACTTCC CCTTCACGGA GCCCTCCGCA
GAGGTCGACA TCCGCTGCAG CTGGGACAAT GGTCAGCTGA AGATCGGCGA AGGCGACGAC
TGGCTTGAAA TTCTCGGTTC CGGCATGGTG CATCCGAAGG TGATCGCCGC TGGCGGGATC
GACCCCGAAA AGTATCAAGG CTTTGCCTTT GGCATCGGGA TCGACCGGCT GGCGATGCTG
AAATACGGAA TCCCAGATCT GCGCGCCTTC TTTGAGAGCG ACCTGCGCTG GTTGCGTCAC
TATGGCTTCA GCTGTCTGGA CGTGCCGACA CTGCATGGCG GCCTGAGCCG CTAA
|
|---|
| Protein sequence | MDDLKAKYLG QIAEATDENA LEAVRLAAVG KKGEVALKMR ELGKMTPEER QVAGPALNAL
KDEINAALAA KKAALGDAAL DERLRSEWLD VTLPTRPRRQ GSIHPISQAS EELTAIFAEM
GFSAQEGPRV DTDWYNFDAL NIPGHHPARA EMDTFYMHRA EGDDRPPHVL RTHTSPVQIR
SMEKLGAPLR IICPGGVYRA DYDQTHTPMF HQVEGLALDE NISMANLKWV LEEFVKSFFE
VDEVELRFRA SHFPFTEPSA EVDIRCSWDN GQLKIGEGDD WLEILGSGMV HPKVIAAGGI
DPEKYQGFAF GIGIDRLAML KYGIPDLRAF FESDLRWLRH YGFSCLDVPT LHGGLSR
|
|---|
| |