| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2508 |
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| Symbol | |
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| ID | 4076510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2649508 |
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| End bp | 2650911 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007832 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_614502 |
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| Protein GI | 99082348 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCCA AAACACTCTA TGACAAGATC TGGGATGCGC ATGTCGCGCA AGAAGCCGAA
GACGGCACCT GTCTGCTTTA TATCGACCGT CACCTCGTTC ACGAGGTGAC AAGCCCGCAA
GCCTTTGAAG GGCTGCGCAT GGCAGGTCGC AAGGTGCACG CGCCAGAGAA AACCATCGCG
GTGCCAGATC ACAACGTCCC CACCACTGCA GGACGCGAAA ACCCCGACCA GATGCCGGAG
GACAGCCGCA TCCAGGTAGC CGCCCTTGAC ACCAACGCGC GTGAGTTCGG CGTGCATTAC
TATCCGGTGA CCGACATCCG CCAGGGTATC GTGCACATCG TCGGCCCCGA GCAAGGCTGG
ACCCTGCCCG GTATGACCGT GGTCTGTGGC GACAGCCACA CCGCGACCCA CGGTGCCTTT
GGCGCGCTGG CGCATGGCAT TGGCACCTCG GAGGTGGAGC ATGTGCTTGC CACCCAGACG
CTGATCCAGA AGAAGTCCAA GAACATGAAG GTCGAGATCA CCGGCAAGCT GTCGCCGGGC
GTGACCGCCA AGGACATCGT TCTGACCATC ATTGGCGAAA CCGGCACCGG TGGCGGCACT
GGCTATGTCA TCGAGTATTG CGGTGAAGCG ATCCGCGATC TGTCGATGGA AGGCCGCATG
ACAATCTGCA ACATGGCCAT TGAGGGCGGC GCACGCGCCG GCCTGATCGC GCCCGACGAG
ACCACCTTTG AATACGTCAA AGGCCGCCCG CATGCCCCCA AAGGCGCGCA GTGGGAAGCC
GCCGTGAACT GGTGGAAAAC GCTCTACTCT GACGACGACG CCCATTGGGA CAAGATTGTG
ACCATCCGCG GCGAAGACAT CGCGCCGACC GTCACATGGG GCACCAGCCC CGAAGACGCG
CTGCCGATCA CCGCAACCGT CCCCGCCCCC GAGGATTTCA CTGGTGGCAA AGTCGAGGCC
GCGCGCCGCG CGCTTGACTA CATGGGCCTC ACCCCCGGGA TGAAGCTGTC GGACATCGAG
ATCGACACCG TGTTCATCGG CTCCTGCACC AACGGCCGCA TCGAAGATCT GCGCGCCGCT
GCGGATGTAG TCAAAGGCAA GAAGATCAAG GACGGCATGC GCGCCATGGT GGTTCCGGGT
TCCGGCCTCG TGCGCGCCCA GGCAGAAGAA GAGGGCCTTG CCGAGATCTT CAAGGATGCC
GGTTTCGAAT GGCGTCTGGC GGGCTGCTCC ATGTGTCTGG CAATGAACCC CGACCAGCTG
AGCGAGGGCG AGCGCTGCGC CTCCACCTCC AACCGGAACT TTGAAGGCCG TCAGGGCTTT
AAGGGACGCA CGCACCTGGT GTCGCCAGCC ATGGCCGCCG CTGCTGCCGT TACCGGCAAA
CTCACCGACG TTCGCGAGCT CTGA
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| Protein sequence | MSPKTLYDKI WDAHVAQEAE DGTCLLYIDR HLVHEVTSPQ AFEGLRMAGR KVHAPEKTIA
VPDHNVPTTA GRENPDQMPE DSRIQVAALD TNAREFGVHY YPVTDIRQGI VHIVGPEQGW
TLPGMTVVCG DSHTATHGAF GALAHGIGTS EVEHVLATQT LIQKKSKNMK VEITGKLSPG
VTAKDIVLTI IGETGTGGGT GYVIEYCGEA IRDLSMEGRM TICNMAIEGG ARAGLIAPDE
TTFEYVKGRP HAPKGAQWEA AVNWWKTLYS DDDAHWDKIV TIRGEDIAPT VTWGTSPEDA
LPITATVPAP EDFTGGKVEA ARRALDYMGL TPGMKLSDIE IDTVFIGSCT NGRIEDLRAA
ADVVKGKKIK DGMRAMVVPG SGLVRAQAEE EGLAEIFKDA GFEWRLAGCS MCLAMNPDQL
SEGERCASTS NRNFEGRQGF KGRTHLVSPA MAAAAAVTGK LTDVREL
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