| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2507 |
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| Symbol | |
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| ID | 4076509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2647796 |
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| End bp | 2649223 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638007831 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_614501 |
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| Protein GI | 99082347 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAAG ACATTCTACC CGAAGAGGTA CAGGGCACGT TGGATTACCT TTTGGAACTG
GCGCAAGACT ATTGGGAAAT CGCGCTCACC CCGGGGTGGC GGCAGTACCA GGTGTTGATC
GTGATCGCTC TGGTTCTGGC GTCGATCCTG ATGCGAAAGC TGACCCAAGG GCGCTGGGAA
GCTTGGGCGC GGTCGCGTGA GGGCTGGCCA AAGTGGCGCC TTCGCCTGGC CGTGCAAGTG
CTCAGGCGGC TGTCGCTGAT CTATTTCACT GTTTTTTCTT GGGTGGTCTT CGCGGTCATG
CAAGAGGTGA CATGGCCCTC CCGCAGCTAT CTTATCGGGG CGGTTGCAAA ACTGGCGACC
GCGTGGCTGG TGATTGCGCT GATGGCGCGC TTTATTGCCA ACCCAACCCT GCGCAAACTC
GCCTCTTGGC TCTTGTGGAT CTACGCAACG CTTGCAGTCT TCAACCTGGT GGATGATACC
GCGCGGGTTC TCGATTCCAC CGCCTTTGAT ATTGGGTCCT TCCATCTCTC GCTGCTGGTT
GTGCTCAAGG CTCTGGTGTT GGCGACCGCT TTGCTTACAT TTGCGCGCAT GGGCTCTGCT
CTGGCTGAGC GTGGCCTCAG CGGCAACGAG GATCTGTCGC CCTCCATGAA GGTGCTCGCC
GGCAAGGCGG TGCAGGTGCT TTTGTACGGG ATCGCATTTG TGATTGTGAT CCGCTCCATC
GGGTTTGATC TCACGGGGCT GGCCGTCCTG TCGGGGGCGG TGGGCGTCGG GATTGGTTTT
GGCTTGCAAA AAGTCGTCTC CAACCTGGTC TCAGGCATCA TCATCTTGAT GGATCGCTCG
ATTAAGCCGG GAGATGTGAT TTCCCTTGGA GAGACCTTTG GTTGGATCAA TGCCCTGGGC
GCGCGCTACG TCTCTGTGGT GACGCGGGAT GGCAAGGAGT ACCTGATCCC GAACGAGGAT
CTGATTACCT CGCAAGTGGT GAACTGGTCG CATTCCAACC GCTATGTGCG GCTCGATATT
CACTTTGGCA CAAGCTATGA TGACGATCCC CATTTGGTGC GCAAAGTGGC TATTGCTGCG
ACGATGACCG TGGACCGCGT GCTGGATCGC GATGGTATGC GGCCGGTCTG TCATATCGTT
GGATTCGGGG ACAGCAGCGT CGATTACATC CTGCGCTTCT GGATCGCGGA TCCAACGGGC
GGACTTACGA ATATTCGCGG CAATGTGTTT CTCGCGCTTT GGGACGCCTT CAAGGCCGAG
GGGGTTTCGA TCCCCTTCCC GCAGCGGGAA TTGCGCCTGT TAAACAATAG TCTGGCTGTC
GAGATGGCCG AAGGGCGTAT GGGGCCTAAG GGTGACGTCG AGGGCGAGGA GCAGGGCAAT
GCGGAGCGCG CGACACAGTC GCGCGGTGCA GCCCCGAAGC TTGATTGA
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| Protein sequence | MEQDILPEEV QGTLDYLLEL AQDYWEIALT PGWRQYQVLI VIALVLASIL MRKLTQGRWE
AWARSREGWP KWRLRLAVQV LRRLSLIYFT VFSWVVFAVM QEVTWPSRSY LIGAVAKLAT
AWLVIALMAR FIANPTLRKL ASWLLWIYAT LAVFNLVDDT ARVLDSTAFD IGSFHLSLLV
VLKALVLATA LLTFARMGSA LAERGLSGNE DLSPSMKVLA GKAVQVLLYG IAFVIVIRSI
GFDLTGLAVL SGAVGVGIGF GLQKVVSNLV SGIIILMDRS IKPGDVISLG ETFGWINALG
ARYVSVVTRD GKEYLIPNED LITSQVVNWS HSNRYVRLDI HFGTSYDDDP HLVRKVAIAA
TMTVDRVLDR DGMRPVCHIV GFGDSSVDYI LRFWIADPTG GLTNIRGNVF LALWDAFKAE
GVSIPFPQRE LRLLNNSLAV EMAEGRMGPK GDVEGEEQGN AERATQSRGA APKLD
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