| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2505 |
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| Symbol | |
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| ID | 4076507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2646706 |
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| End bp | 2647176 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007829 |
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| Product | rRNA large subunit methyltransferase |
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| Protein accession | YP_614499 |
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| Protein GI | 99082345 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.945711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTAC ATATCTGCGC GGTCGGGCGT CTGCGCGCTG GGCCGGAAAA GACGTTGATT
GATGACTATC TGCAGCGGTT TGACCGCAGC GGGCGCGCTC TGGGTCTTGG CCCGGCCAGG
GTGATTGAGG TCGAAGACAA GAAAAACGCA GGGATGGGCG CCGAAGCGGA TCTGCTGCGC
AAGGCACTGC CCAAAGGGGC GCTGATCTGC ACCTTGGATG AGCGGGGGAA GGTCATATCC
TCGCCGGATT TTGCCGAGAA GCTTGCAGGG TGGCGCGACA TGGGGCGGCA GGACCTGGCC
TTTGTCATCG GTGGTGCCGA TGGAATCGAC CCCTCGTTGC GCGCCGAAGC GGATTTTTCG
ATTTCCTTTG GCAAGATGGT CTGGCCACAC ATGATGGTGC GCCTGATGCT GGCTGAGCAG
GTCTATCGCT CCGCCACGAT CCTCTCGGGC AGTCCCTATC ACCGGGTCTG A
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| Protein sequence | MRVHICAVGR LRAGPEKTLI DDYLQRFDRS GRALGLGPAR VIEVEDKKNA GMGAEADLLR
KALPKGALIC TLDERGKVIS SPDFAEKLAG WRDMGRQDLA FVIGGADGID PSLRAEADFS
ISFGKMVWPH MMVRLMLAEQ VYRSATILSG SPYHRV
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