| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2493 |
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| Symbol | |
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| ID | 4076858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2633749 |
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| End bp | 2635221 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007817 |
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| Product | succinate semialdehyde dehydrogenase |
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| Protein accession | YP_614487 |
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| Protein GI | 99082333 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.295666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACG CGACAACCGA CCTGAAATCC CTTCTGGCGG ACCCCACCCT GCTGGAAGAC
CGGGCCTACA TCAATGGCGC TTTTGTCGCT GGCGAGGGCA CATTTGAAGT GACCAACCCG
GCGCGCGGTG ATGTGATCGC CAATGTGGCG GATGTCAGCC GCATGCAAGC CCGCGACGCC
ATTGCAGCAG CACAGGGCGC GCAAAAGGAA TGGGCGAAAT GGACTGGCAA GGAGCGCGCA
GGCGTTCTGC GCAAATGGTT CGACCTGATG ATGGCCCATC AGGAAGATCT CGCCGTGATC
CTGACGGCTG AAATGGGCAA GCCGCTGGCC GAGGCACGCG GCGAAATCGC CTACGGTGCC
TCTTTCATTG AATTCTTTGC CGAAGAGGCC AAGCGCGTCT ATGGCGAAAC CATTCCTGGT
CACCAACGCG ACAAACGGAT CACCGTGATC AAGCAACCCA TTGGCGTTGC CGCTTCGATC
ACGCCATGGA ATTTCCCCAA CGCCATGATC ACCCGCAAGG CAGGGCCGGC ACTGGCGGCC
GGCTGTGCCT TTGTGGCGCG CCCGGCCTCT GAAACACCGC TCTCCGCCAC CGCACTCGCC
GTATTGGCAG AACGCGCGGG CATCCCTGCG GGTGTTTTCA ATGTCATCCC CGCTTCGGAC
GCCTCCGGCA TTGGCAAGGA ATTCTGCGAG AACCCGATTG TGCGCAAGCT GACGTTTACC
GGGTCAACCA ACGTCGGTCG AATCCTGCTC CGCCAAGCAG CGGATCAGGT GATGAAATGC
TCCATGGAGC TCGGCGGCAA CGCACCTTTC ATCGTGTTCG ATGACGCCGA TCTCGATGCG
GCGGTCGAGG GCGCCATCAT GTGCAAGTTC CGCAATAATG GCCAAACCTG CGTCTGTGCC
AACCGGATCT ATGTGCAGTC TGGGATCTAT GATGCGTTTG CCGCCAAGCT GAAGGAAAAA
GTCGAGGCCA TGAAGGTCGG AGACGGGCTT GAGGATGGCA CGCACTTTGG CCCATTGATC
TCTGAGGCTG CAGTCAAGAA GGTCGAAGAC CACATCGCGG ATGCCATGGA CAAGGGTGCC
GAGGTAATCC TAGGCGGCGC GCCATCAGAG CTCGGTGGCA CCTTCTTTGA ACCCACCATC
GTGACCGGCG CGACACCGGA CATGGCTTTC GCGCAGGATG AGACCTTTGG CCCGCTCGCG
CCGCTCTTCA AGTTTGAGAC CGAAGACGAG GTGATCGAGA TGGCGAATGA CACCATCTTT
GGCCTTGCAT CCTATTTCTA TGCCAAGGAT CTGAGCCGCG TGTACAAGGT CGCCGAGGCG
CTGGAATACG GAATTGTGGG GATCAATACA GGGATTATTT CTACCGAGCT TGCGCCCTTT
GGAGGTGTAA AACAATCCGG GCTTGGACGG GAAGGCAGCC ATCACGGCAT CGAGGACTAT
CTCGAAATGA AGTACCTCTG CATGTCCGTT TAA
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| Protein sequence | MLDATTDLKS LLADPTLLED RAYINGAFVA GEGTFEVTNP ARGDVIANVA DVSRMQARDA
IAAAQGAQKE WAKWTGKERA GVLRKWFDLM MAHQEDLAVI LTAEMGKPLA EARGEIAYGA
SFIEFFAEEA KRVYGETIPG HQRDKRITVI KQPIGVAASI TPWNFPNAMI TRKAGPALAA
GCAFVARPAS ETPLSATALA VLAERAGIPA GVFNVIPASD ASGIGKEFCE NPIVRKLTFT
GSTNVGRILL RQAADQVMKC SMELGGNAPF IVFDDADLDA AVEGAIMCKF RNNGQTCVCA
NRIYVQSGIY DAFAAKLKEK VEAMKVGDGL EDGTHFGPLI SEAAVKKVED HIADAMDKGA
EVILGGAPSE LGGTFFEPTI VTGATPDMAF AQDETFGPLA PLFKFETEDE VIEMANDTIF
GLASYFYAKD LSRVYKVAEA LEYGIVGINT GIISTELAPF GGVKQSGLGR EGSHHGIEDY
LEMKYLCMSV
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