| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2486 |
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| Symbol | |
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| ID | 4076851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2625094 |
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| End bp | 2626938 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007810 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_614480 |
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| Protein GI | 99082326 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.274808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.116227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATGT ACCGATCAAG AACCTCCACC CACGGTCGCA ACATGGCCGG CGCTCGTGGC
CTCTGGCGCG CCACTGGCAT GACCGAAAGC GACTTCGGCA AGCCGATCAT CGCCATCGTG
AACTCCTTCA CCCAATTCGT CCCCGGCCAC GTTCACCTCA AGGATCTGGG GCAGATGGTG
GCCCGTGAGG TTGAGTCCGC TGGCGGTGTG GCCAAGGAGT TCAACACCAT CGCTGTGGAC
GACGGCATCG CCATGGGCCA CGATGGCATG CTCTATTCGC TCCCCTCGCG CGAGGTGATC
GCGGATTCGG TTGAGTATAT GGTCAACGCC CATTGCGCCG ACGCGATGGT CTGTATCTCC
AACTGCGACA AGATCACCCC CGGCATGATG ATGGCCGCAA TGCGCCTCAA CATCCCGGTG
ATCTTTGTGT CCGGTGGCCC GATGGAAGCG GGCAAGATCG ACATCGACTC CCTTGATGCC
AAGAAAATCG ACCTCGTGGA CGCAATGGTT GCCGCCGCAA GCGACAAGCT GACCGACGAG
GAAGTCCAGC ACATCGAGGA AAACGCCTGC CCCACATGTG GCTCCTGCTC TGGCATGTTC
ACCGCAAACT CGATGAACTG TCTGGCCGAA GCCCTTGGGC TTGCGCTGCC CGGCAATGGC
TCCACCCTGG CCACCCACTC GGATCGCAAG CAATTGTTCC TCGAGGCGGG GCGCAAGATC
GTCGAGATCA CCAAGCGCCA CTATGAGCAG AACGAAAAAG GCCTGCTGCC GCGCGAAATC
GCCACCTTTG AGGCGTTTGA GAACGCCATG AGCCTTGATA TTGCCATGGG CGGCTCCACC
AATACCGTTT TGCACCTCCT CGCCATCGCG CATGAGGGCA AGGTAGACTT CACCATGCAA
GACATCGACC GGCTGAGCCG CAAGGTGCCC TGCCTGTGTA AAGTCGCGCC CAATATCGAG
AACGTCCATA TGGAGGACGT TCACCGCGCC GGTGGGATCT TCTCGATCCT CGGGGAGCTG
TCCCGTGCAG GCCTCCTGCA CAATGACGTC CCGACGGTCC ACAGCGACAG CATGGGTGAA
GCCATCGCCC ATTGGGACAT CGCTGTGGCG GACAACCAAG CGGCGAAGGA CCTCTTCAAG
GCCGCTCCCG GCGGAGTGCG TACGACGCAG GCCTTCAGCC AGTCCAACCG CTTCAAGGAT
CTCGACATCG ACCGCAAGGG CGGCGTTATC CGCTCCAAGG AACATGCCTT CAGCCAGGAC
GGCGGCCTCG CGGTGCTCTT TGGGAATATC GCACTGGATG GCTGCATCGT GAAAACGGCG
GGCGTGGACG CCTCGATCCT GAAGTTCACC GGCAAAGCCT ATGTCTGCGA GAGCCAGGAC
CAGGCCGTCA ATGATATCCT CACCGGCAAA GTTCAGGCGG GCGATGTAGT TGTCATCCGC
TATGAGGGGC CGCGCGGGGG ACCGGGCATG CAGGAAATGC TCTACCCAAC GTCCTACCTC
AAATCCAAGG GGCTCGGAAA AGACTGTGCT CTGTTGACCG ATGGGCGTTT CTCCGGCGGC
ACGTCGGGGC TTTCCATTGG CCACGTCTCG CCCGAAGCCG CCGAAGGTGG CACCATCGGC
CTCGTGGAGC ATGGCGACAC CATCGAGATC GATATCCCCA ACCGTTCCAT CCATCTGGCG
GTGGATGAGG CCACCCTTGC AGCGCGCCGC GCCGCGCAGG ATGAGAAAGG CTGGAAACCT
GTTGCCAAGC GTAAACGCAA GGTATCAACC GCGCTCAAGG CTTACGCCTT GCTGGCCACA
TCTGCAGCCA AAGGCGCTGT GCGCCAACTG CCAGACGACG AGTAA
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| Protein sequence | MPMYRSRTST HGRNMAGARG LWRATGMTES DFGKPIIAIV NSFTQFVPGH VHLKDLGQMV
AREVESAGGV AKEFNTIAVD DGIAMGHDGM LYSLPSREVI ADSVEYMVNA HCADAMVCIS
NCDKITPGMM MAAMRLNIPV IFVSGGPMEA GKIDIDSLDA KKIDLVDAMV AAASDKLTDE
EVQHIEENAC PTCGSCSGMF TANSMNCLAE ALGLALPGNG STLATHSDRK QLFLEAGRKI
VEITKRHYEQ NEKGLLPREI ATFEAFENAM SLDIAMGGST NTVLHLLAIA HEGKVDFTMQ
DIDRLSRKVP CLCKVAPNIE NVHMEDVHRA GGIFSILGEL SRAGLLHNDV PTVHSDSMGE
AIAHWDIAVA DNQAAKDLFK AAPGGVRTTQ AFSQSNRFKD LDIDRKGGVI RSKEHAFSQD
GGLAVLFGNI ALDGCIVKTA GVDASILKFT GKAYVCESQD QAVNDILTGK VQAGDVVVIR
YEGPRGGPGM QEMLYPTSYL KSKGLGKDCA LLTDGRFSGG TSGLSIGHVS PEAAEGGTIG
LVEHGDTIEI DIPNRSIHLA VDEATLAARR AAQDEKGWKP VAKRKRKVST ALKAYALLAT
SAAKGAVRQL PDDE
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