Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2483 |
Symbol | |
ID | 4076848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2622133 |
End bp | 2622999 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638007807 |
Product | hypothetical protein |
Protein accession | YP_614477 |
Protein GI | 99082323 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.941945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.050629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGTG ACACCCTGCG AGGCAGCCTG TTGATGGCGC TCGCAATGGC GGCCTTTGCC GTCGAGGATA TGATCATCAA GTCGGTCGCC GCTGCGATGC CCACCGGGCA AGTGCTGATC CTTTTTGGGC TGGGCGGGAT GGTGATCTTT GCGATCATGG CGTGTGCGCA AGGCTCCGCG CTCTGGCACC CGGGGTTTTG CACGCGTCCG CTGTTGTGGC GCTTTGTGGC CGAAGTCTCG GGGCGTCTGT TCTTCACCCT GGCGATTGTT CTGGCACCTT TGTCCCTGGC CTCAGCCATT TTGCAGGCCA CCCCGCTTGT GGTGACCGCC GGGGCTGTGG TGTTTTTTGG CGAGTCCGTG GGCTGGCGGC GATGGCTGGC GATCTGTGTC GGGTTTCTCG GCGTCTTGAT GATCCTGCGC CCGGGGCTCA GTGGATTTGA GGCCACCTCT CTGCTCGCAG TTGCGGGCAT GCTTGGATTC GCGGGGCGGG ATCTGGCGAC CCGCGCAGCT CCCAAAACCA TGAGCAATGC ACAGCTTGGG CTTTTTGGCT TTGCAATGCT GGTGATTGCG GGCGTGATCC TGTTGTCTTG GACGGGCGGA GCAGTTTGGC CAACCGTTGC GCAGAGCGGC ACGCTCGCGG CGGCAGTGGC GGTCGGGGTC CTGGCCTATA TGGCACTTAC GGGCGCGATG CGGACCGGAG AAATCTCTGT GGTTGCGCCG TTTCGCTACA CCCGGCTTGT CTTTGCCATG GCGCTAGGAA TTGCAGTATT TGGAGAGCGC CCGGATGTGA TGACGCTCTT GGGCTCCGCC TTGGTGGTGG GCAGCGGGAT CTTTACGCTT CTGCGCAATC AGCGACAGAA GGCGTGA
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Protein sequence | MERDTLRGSL LMALAMAAFA VEDMIIKSVA AAMPTGQVLI LFGLGGMVIF AIMACAQGSA LWHPGFCTRP LLWRFVAEVS GRLFFTLAIV LAPLSLASAI LQATPLVVTA GAVVFFGESV GWRRWLAICV GFLGVLMILR PGLSGFEATS LLAVAGMLGF AGRDLATRAA PKTMSNAQLG LFGFAMLVIA GVILLSWTGG AVWPTVAQSG TLAAAVAVGV LAYMALTGAM RTGEISVVAP FRYTRLVFAM ALGIAVFGER PDVMTLLGSA LVVGSGIFTL LRNQRQKA
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