| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2480 |
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| Symbol | |
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| ID | 4076845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2620035 |
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| End bp | 2620835 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638007804 |
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| Product | VacJ-like lipoprotein |
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| Protein accession | YP_614474 |
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| Protein GI | 99082320 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.389339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0468041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGACC CGGCGCCAGT TATAACTGAA TTGGTAGACA TGATTGCCCT GTTTAAAAAA
TCCGTGACCG CGATGGCCTT TTCCGCGGCG GTCCTGACTT CGGCCTGTGC CACCCAAGAC
CCTGCCGCCA AGGCCGCCGG TGAGATTTTC GACCCCTACG AGAATACAAA CCGCTCCATT
CACCAGTTCA ACAAAGGGCT CGACCGCTAT GCGTTCCGCC CGGCGTCCAA AGGCTACGTC
GCTGTGGTTC CGCCCGATAT GGTTACGGCT TTTGGCAATT TTGCCGAGAA CCTGTCCAAG
CCTGGCGACG CAGTGAACTA TCTGCTACAG GGAAATTTCA AAGGTGCTGG GCAAGCGCTG
GGGCGTTTTG CCGTGAACAC CGTCCTCGGG ATCGGTGGGC TTGGCGATCC CGCATCTGAT
TTCAAGATGC CCGAAGCCCG GACCGACTTT GGTGAGACCC TGCATATCTG GGGTGCGGGC
GAAGGCGCCT ATGTGGAGCT GCCCGCTTAT GGTCCCTCCA CCACCCGTGA TGCTGTCGGG
ATCGTGGTCG ACTTTTTCAC CAACCCGCTC AGCCAGTTTG AGAACAATCC CGCCGAAGAC
CTGCAGATCC CGGCCGAGAT CGTGGATCAG CTTGGCAATC GCGGTACATA TTCCGACACG
ATCGATTCGA TTCTTTACGA GAGCGCCGAC AGCTACGCAC AGGGCCGCCA GATCTACCTG
CAGAACCGCC GTTTCGAGCT GGGGCAGGAA GACGTGAATT CCGAGATCGA TCCGTTCGAA
CTAGATACCG GAGGGTTCTA A
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| Protein sequence | MRDPAPVITE LVDMIALFKK SVTAMAFSAA VLTSACATQD PAAKAAGEIF DPYENTNRSI
HQFNKGLDRY AFRPASKGYV AVVPPDMVTA FGNFAENLSK PGDAVNYLLQ GNFKGAGQAL
GRFAVNTVLG IGGLGDPASD FKMPEARTDF GETLHIWGAG EGAYVELPAY GPSTTRDAVG
IVVDFFTNPL SQFENNPAED LQIPAEIVDQ LGNRGTYSDT IDSILYESAD SYAQGRQIYL
QNRRFELGQE DVNSEIDPFE LDTGGF
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