| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2476 |
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| Symbol | |
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| ID | 4076841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2615443 |
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| End bp | 2616219 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007800 |
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| Product | glycerophosphoryl diester phosphodiesterase |
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| Protein accession | YP_614470 |
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| Protein GI | 99082316 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.650377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0557438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCCC CACGCCTGCC TTTGGCCTTT TTGCAGCGCC CGATCACGCA TCGAGCGCTG
CATGGTCTTG ACGAAAATTG CCCCGAGAAC AGCCGCGCCG CCATCCGCGC GGCAATCGCG
GCGGGGTATG GCATCGAAAT CGACCTGCAA TTGTCCGCCG ACGGGCAGGC GATGGTCTTT
CACGATGATG AACTCGACCG GTTGACGGAT GCCACCGGTC CCGTTCGCGC GCGCACCGCG
GTGGAGCTCG GCACTATCGC GCTGCGTCAT GGGGACGGTG AATGCATCCC AAGCTTTGCC
GAAGTTCTGG AACTGGTGGC CGGGCAGGTG CCGCTTCTGA TCGAGATCAA GGATCAGGAC
GGCGCGATGG GGACAAATGT AGGGGCGCTG GAGGCTGCAG CGATTACGGA TTTGCGCGAT
TATCAGGGCG ATGTCGCGCT CATGTCCTTT AATCCCAACA GCATGGCCGA AGTGGCGCGG
CTCGCGCCCC ATTTGGCGCG GGGCCTGACC ACTAGCGCCT ATGATCCGCT CGAGTGGGCG
CCGCTGTCGC CGGCGCGCTG CGACGAATTG CGAGACATTC CGGACTTCGA GCGTGTCAGC
GCGAGCTTTA TCAGTCACGA GGCGAGTGAC GTGGGCTGTG ACCGGGTGCG CAGCCTGCGC
GCCGCTGGGG TGCCCGTCTT GTCCTGGACC CTACGCACTC CGGCGCAGGA GGCAGAGATC
GCCAGTCTCG TCGATAACGT CACGTTTGAA AACTATCTTT CTGCCTTCGG CGCTTGA
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| Protein sequence | MTAPRLPLAF LQRPITHRAL HGLDENCPEN SRAAIRAAIA AGYGIEIDLQ LSADGQAMVF
HDDELDRLTD ATGPVRARTA VELGTIALRH GDGECIPSFA EVLELVAGQV PLLIEIKDQD
GAMGTNVGAL EAAAITDLRD YQGDVALMSF NPNSMAEVAR LAPHLARGLT TSAYDPLEWA
PLSPARCDEL RDIPDFERVS ASFISHEASD VGCDRVRSLR AAGVPVLSWT LRTPAQEAEI
ASLVDNVTFE NYLSAFGA
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