Gene TM1040_2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2472 
Symbol 
ID4076837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2612366 
End bp2612851 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content58% 
IMG OID638007796 
Productthiol peroxidase (atypical 2-Cys peroxiredoxin) 
Protein accessionYP_614466 
Protein GI99082312 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0678] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.935379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0127804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATCTG TTGGAGACAA ACTCCCCGAG GCCACCTTGA CCCGACTGGG CGCCGAAGGC 
CCCGAAGCGG TTGCGATCCA AGACCTCGCC AAGGGGCGCA AGCTGGCCAT TTTCGCTGTG
CCGGGCGCCT TTACTCCCAC TTGCCACTCT GCGCATGTGC CGAGTTTCAT TCGTACCAAG
GACCAGTTTG CGGCCAAAGG CGTTGACGAA ATCATCTGTA TCTCAGGCAA CGATCCCTTC
GTCATGAAAG CCTGGGGCGA GGCCACCGGG GCAACCGAGG CGGGAATCAC CATGCTGGCA
GATGCGGAGT GCAGCTTTAC CGATGCAATC GGGATGCGTT TTGACGCGCC ACCAGCCGGG
CTCATCGGGC GTTCCAAACG CTACGCAATG ATCGTCGAGG ATGGTGAGGT AAAAATCCTG
CACCTCGAAG AAAGTCCGGG AACATGTGAA GTGTCTGCTG GTGAAGGGCT GCTGGATGCG
TTGTAA
 
Protein sequence
MISVGDKLPE ATLTRLGAEG PEAVAIQDLA KGRKLAIFAV PGAFTPTCHS AHVPSFIRTK 
DQFAAKGVDE IICISGNDPF VMKAWGEATG ATEAGITMLA DAECSFTDAI GMRFDAPPAG
LIGRSKRYAM IVEDGEVKIL HLEESPGTCE VSAGEGLLDA L