Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2472 |
Symbol | |
ID | 4076837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2612366 |
End bp | 2612851 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638007796 |
Product | thiol peroxidase (atypical 2-Cys peroxiredoxin) |
Protein accession | YP_614466 |
Protein GI | 99082312 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0678] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.935379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0127804 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATCTG TTGGAGACAA ACTCCCCGAG GCCACCTTGA CCCGACTGGG CGCCGAAGGC CCCGAAGCGG TTGCGATCCA AGACCTCGCC AAGGGGCGCA AGCTGGCCAT TTTCGCTGTG CCGGGCGCCT TTACTCCCAC TTGCCACTCT GCGCATGTGC CGAGTTTCAT TCGTACCAAG GACCAGTTTG CGGCCAAAGG CGTTGACGAA ATCATCTGTA TCTCAGGCAA CGATCCCTTC GTCATGAAAG CCTGGGGCGA GGCCACCGGG GCAACCGAGG CGGGAATCAC CATGCTGGCA GATGCGGAGT GCAGCTTTAC CGATGCAATC GGGATGCGTT TTGACGCGCC ACCAGCCGGG CTCATCGGGC GTTCCAAACG CTACGCAATG ATCGTCGAGG ATGGTGAGGT AAAAATCCTG CACCTCGAAG AAAGTCCGGG AACATGTGAA GTGTCTGCTG GTGAAGGGCT GCTGGATGCG TTGTAA
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Protein sequence | MISVGDKLPE ATLTRLGAEG PEAVAIQDLA KGRKLAIFAV PGAFTPTCHS AHVPSFIRTK DQFAAKGVDE IICISGNDPF VMKAWGEATG ATEAGITMLA DAECSFTDAI GMRFDAPPAG LIGRSKRYAM IVEDGEVKIL HLEESPGTCE VSAGEGLLDA L
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